Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16442 | 49549;49550;49551 | chr2:178614073;178614072;178614071 | chr2:179478800;179478799;179478798 |
N2AB | 14801 | 44626;44627;44628 | chr2:178614073;178614072;178614071 | chr2:179478800;179478799;179478798 |
N2A | 13874 | 41845;41846;41847 | chr2:178614073;178614072;178614071 | chr2:179478800;179478799;179478798 |
N2B | 7377 | 22354;22355;22356 | chr2:178614073;178614072;178614071 | chr2:179478800;179478799;179478798 |
Novex-1 | 7502 | 22729;22730;22731 | chr2:178614073;178614072;178614071 | chr2:179478800;179478799;179478798 |
Novex-2 | 7569 | 22930;22931;22932 | chr2:178614073;178614072;178614071 | chr2:179478800;179478799;179478798 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.39 | N | 0.41 | 0.065 | 0.367803931526 | gnomAD-4.0.0 | 6.84796E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16095E-05 | 0 |
I/V | rs2056850681 | None | 0.39 | N | 0.424 | 0.068 | 0.355450299083 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6635 | likely_pathogenic | 0.6369 | pathogenic | -2.132 | Highly Destabilizing | 0.904 | D | 0.617 | neutral | None | None | None | None | N |
I/C | 0.7579 | likely_pathogenic | 0.7436 | pathogenic | -1.343 | Destabilizing | 0.999 | D | 0.735 | deleterious | None | None | None | None | N |
I/D | 0.9828 | likely_pathogenic | 0.9756 | pathogenic | -1.899 | Destabilizing | 0.995 | D | 0.898 | deleterious | None | None | None | None | N |
I/E | 0.925 | likely_pathogenic | 0.9012 | pathogenic | -1.731 | Destabilizing | 0.985 | D | 0.887 | deleterious | None | None | None | None | N |
I/F | 0.2798 | likely_benign | 0.2399 | benign | -1.224 | Destabilizing | 0.971 | D | 0.597 | neutral | None | None | None | None | N |
I/G | 0.9312 | likely_pathogenic | 0.9148 | pathogenic | -2.621 | Highly Destabilizing | 0.985 | D | 0.867 | deleterious | None | None | None | None | N |
I/H | 0.8959 | likely_pathogenic | 0.8598 | pathogenic | -1.827 | Destabilizing | 0.999 | D | 0.872 | deleterious | None | None | None | None | N |
I/K | 0.8185 | likely_pathogenic | 0.7598 | pathogenic | -1.587 | Destabilizing | 0.981 | D | 0.875 | deleterious | N | 0.47856743 | None | None | N |
I/L | 0.1734 | likely_benign | 0.1546 | benign | -0.764 | Destabilizing | 0.18 | N | 0.367 | neutral | N | 0.471370576 | None | None | N |
I/M | 0.126 | likely_benign | 0.1181 | benign | -0.63 | Destabilizing | 0.39 | N | 0.41 | neutral | N | 0.475478231 | None | None | N |
I/N | 0.8606 | likely_pathogenic | 0.817 | pathogenic | -1.761 | Destabilizing | 0.995 | D | 0.906 | deleterious | None | None | None | None | N |
I/P | 0.988 | likely_pathogenic | 0.9844 | pathogenic | -1.195 | Destabilizing | 0.995 | D | 0.905 | deleterious | None | None | None | None | N |
I/Q | 0.805 | likely_pathogenic | 0.7565 | pathogenic | -1.707 | Destabilizing | 0.985 | D | 0.898 | deleterious | None | None | None | None | N |
I/R | 0.7918 | likely_pathogenic | 0.7217 | pathogenic | -1.202 | Destabilizing | 0.981 | D | 0.904 | deleterious | N | 0.472753871 | None | None | N |
I/S | 0.7859 | likely_pathogenic | 0.7454 | pathogenic | -2.479 | Highly Destabilizing | 0.985 | D | 0.726 | deleterious | None | None | None | None | N |
I/T | 0.5217 | ambiguous | 0.4905 | ambiguous | -2.164 | Highly Destabilizing | 0.877 | D | 0.735 | deleterious | N | 0.458334824 | None | None | N |
I/V | 0.0612 | likely_benign | 0.0622 | benign | -1.195 | Destabilizing | 0.39 | N | 0.424 | neutral | N | 0.467631038 | None | None | N |
I/W | 0.9526 | likely_pathogenic | 0.9412 | pathogenic | -1.479 | Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | N |
I/Y | 0.8422 | likely_pathogenic | 0.7872 | pathogenic | -1.19 | Destabilizing | 0.985 | D | 0.721 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.