Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16476 | 49651;49652;49653 | chr2:178613857;178613856;178613855 | chr2:179478584;179478583;179478582 |
N2AB | 14835 | 44728;44729;44730 | chr2:178613857;178613856;178613855 | chr2:179478584;179478583;179478582 |
N2A | 13908 | 41947;41948;41949 | chr2:178613857;178613856;178613855 | chr2:179478584;179478583;179478582 |
N2B | 7411 | 22456;22457;22458 | chr2:178613857;178613856;178613855 | chr2:179478584;179478583;179478582 |
Novex-1 | 7536 | 22831;22832;22833 | chr2:178613857;178613856;178613855 | chr2:179478584;179478583;179478582 |
Novex-2 | 7603 | 23032;23033;23034 | chr2:178613857;178613856;178613855 | chr2:179478584;179478583;179478582 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.02 | N | 0.179 | 0.032 | 0.134241683229 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
D/N | None | None | 0.939 | N | 0.478 | 0.299 | 0.281381271821 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2464 | likely_benign | 0.2235 | benign | -0.152 | Destabilizing | 0.939 | D | 0.499 | neutral | N | 0.475525593 | None | None | I |
D/C | 0.6396 | likely_pathogenic | 0.5988 | pathogenic | 0.317 | Stabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | I |
D/E | 0.1534 | likely_benign | 0.1352 | benign | -0.308 | Destabilizing | 0.02 | N | 0.179 | neutral | N | 0.459006083 | None | None | I |
D/F | 0.5887 | likely_pathogenic | 0.5484 | ambiguous | -0.382 | Destabilizing | 0.998 | D | 0.676 | prob.neutral | None | None | None | None | I |
D/G | 0.3413 | ambiguous | 0.3139 | benign | -0.326 | Destabilizing | 0.939 | D | 0.489 | neutral | N | 0.468645562 | None | None | I |
D/H | 0.3371 | likely_benign | 0.3025 | benign | -0.407 | Destabilizing | 0.998 | D | 0.503 | neutral | N | 0.473429401 | None | None | I |
D/I | 0.3856 | ambiguous | 0.351 | ambiguous | 0.247 | Stabilizing | 0.993 | D | 0.701 | prob.neutral | None | None | None | None | I |
D/K | 0.4515 | ambiguous | 0.4132 | ambiguous | 0.402 | Stabilizing | 0.91 | D | 0.463 | neutral | None | None | None | None | I |
D/L | 0.4569 | ambiguous | 0.4122 | ambiguous | 0.247 | Stabilizing | 0.986 | D | 0.683 | prob.neutral | None | None | None | None | I |
D/M | 0.608 | likely_pathogenic | 0.5681 | pathogenic | 0.514 | Stabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | I |
D/N | 0.1224 | likely_benign | 0.1152 | benign | 0.272 | Stabilizing | 0.939 | D | 0.478 | neutral | N | 0.471925356 | None | None | I |
D/P | 0.9653 | likely_pathogenic | 0.9649 | pathogenic | 0.136 | Stabilizing | 0.993 | D | 0.513 | neutral | None | None | None | None | I |
D/Q | 0.395 | ambiguous | 0.3406 | ambiguous | 0.279 | Stabilizing | 0.973 | D | 0.455 | neutral | None | None | None | None | I |
D/R | 0.5042 | ambiguous | 0.4582 | ambiguous | 0.392 | Stabilizing | 0.986 | D | 0.619 | neutral | None | None | None | None | I |
D/S | 0.1432 | likely_benign | 0.1312 | benign | 0.169 | Stabilizing | 0.953 | D | 0.407 | neutral | None | None | None | None | I |
D/T | 0.248 | likely_benign | 0.2185 | benign | 0.295 | Stabilizing | 0.986 | D | 0.469 | neutral | None | None | None | None | I |
D/V | 0.2476 | likely_benign | 0.2209 | benign | 0.136 | Stabilizing | 0.991 | D | 0.677 | prob.neutral | N | 0.467182752 | None | None | I |
D/W | 0.8839 | likely_pathogenic | 0.8699 | pathogenic | -0.36 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | I |
D/Y | 0.2412 | likely_benign | 0.2259 | benign | -0.171 | Destabilizing | 0.997 | D | 0.677 | prob.neutral | N | 0.434756384 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.