Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1647649651;49652;49653 chr2:178613857;178613856;178613855chr2:179478584;179478583;179478582
N2AB1483544728;44729;44730 chr2:178613857;178613856;178613855chr2:179478584;179478583;179478582
N2A1390841947;41948;41949 chr2:178613857;178613856;178613855chr2:179478584;179478583;179478582
N2B741122456;22457;22458 chr2:178613857;178613856;178613855chr2:179478584;179478583;179478582
Novex-1753622831;22832;22833 chr2:178613857;178613856;178613855chr2:179478584;179478583;179478582
Novex-2760323032;23033;23034 chr2:178613857;178613856;178613855chr2:179478584;179478583;179478582
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: D
  • RefSeq wild type transcript codon: GAT
  • RefSeq wild type template codon: CTA
  • Domain: Fn3-7
  • Domain position: 27
  • Structural Position: 29
  • Q(SASA): 0.4634
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
D/E None None 0.02 N 0.179 0.032 0.134241683229 gnomAD-4.0.0 1.20032E-06 None None None None I None 0 0 None 0 0 None 0 0 1.3125E-06 0 0
D/N None None 0.939 N 0.478 0.299 0.281381271821 gnomAD-4.0.0 3.60097E-06 None None None None I None 0 0 None 0 0 None 0 0 3.9375E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
D/A 0.2464 likely_benign 0.2235 benign -0.152 Destabilizing 0.939 D 0.499 neutral N 0.475525593 None None I
D/C 0.6396 likely_pathogenic 0.5988 pathogenic 0.317 Stabilizing 0.999 D 0.695 prob.neutral None None None None I
D/E 0.1534 likely_benign 0.1352 benign -0.308 Destabilizing 0.02 N 0.179 neutral N 0.459006083 None None I
D/F 0.5887 likely_pathogenic 0.5484 ambiguous -0.382 Destabilizing 0.998 D 0.676 prob.neutral None None None None I
D/G 0.3413 ambiguous 0.3139 benign -0.326 Destabilizing 0.939 D 0.489 neutral N 0.468645562 None None I
D/H 0.3371 likely_benign 0.3025 benign -0.407 Destabilizing 0.998 D 0.503 neutral N 0.473429401 None None I
D/I 0.3856 ambiguous 0.351 ambiguous 0.247 Stabilizing 0.993 D 0.701 prob.neutral None None None None I
D/K 0.4515 ambiguous 0.4132 ambiguous 0.402 Stabilizing 0.91 D 0.463 neutral None None None None I
D/L 0.4569 ambiguous 0.4122 ambiguous 0.247 Stabilizing 0.986 D 0.683 prob.neutral None None None None I
D/M 0.608 likely_pathogenic 0.5681 pathogenic 0.514 Stabilizing 0.999 D 0.677 prob.neutral None None None None I
D/N 0.1224 likely_benign 0.1152 benign 0.272 Stabilizing 0.939 D 0.478 neutral N 0.471925356 None None I
D/P 0.9653 likely_pathogenic 0.9649 pathogenic 0.136 Stabilizing 0.993 D 0.513 neutral None None None None I
D/Q 0.395 ambiguous 0.3406 ambiguous 0.279 Stabilizing 0.973 D 0.455 neutral None None None None I
D/R 0.5042 ambiguous 0.4582 ambiguous 0.392 Stabilizing 0.986 D 0.619 neutral None None None None I
D/S 0.1432 likely_benign 0.1312 benign 0.169 Stabilizing 0.953 D 0.407 neutral None None None None I
D/T 0.248 likely_benign 0.2185 benign 0.295 Stabilizing 0.986 D 0.469 neutral None None None None I
D/V 0.2476 likely_benign 0.2209 benign 0.136 Stabilizing 0.991 D 0.677 prob.neutral N 0.467182752 None None I
D/W 0.8839 likely_pathogenic 0.8699 pathogenic -0.36 Destabilizing 0.999 D 0.695 prob.neutral None None None None I
D/Y 0.2412 likely_benign 0.2259 benign -0.171 Destabilizing 0.997 D 0.677 prob.neutral N 0.434756384 None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.