Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16492 | 49699;49700;49701 | chr2:178613809;178613808;178613807 | chr2:179478536;179478535;179478534 |
N2AB | 14851 | 44776;44777;44778 | chr2:178613809;178613808;178613807 | chr2:179478536;179478535;179478534 |
N2A | 13924 | 41995;41996;41997 | chr2:178613809;178613808;178613807 | chr2:179478536;179478535;179478534 |
N2B | 7427 | 22504;22505;22506 | chr2:178613809;178613808;178613807 | chr2:179478536;179478535;179478534 |
Novex-1 | 7552 | 22879;22880;22881 | chr2:178613809;178613808;178613807 | chr2:179478536;179478535;179478534 |
Novex-2 | 7619 | 23080;23081;23082 | chr2:178613809;178613808;178613807 | chr2:179478536;179478535;179478534 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.767 | N | 0.491 | 0.184 | 0.247872288689 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1177 | likely_benign | 0.1237 | benign | -1.339 | Destabilizing | 0.767 | D | 0.491 | neutral | N | 0.470570512 | None | None | N |
P/C | 0.6215 | likely_pathogenic | 0.6391 | pathogenic | -0.724 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
P/D | 0.653 | likely_pathogenic | 0.6873 | pathogenic | -1.082 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
P/E | 0.4064 | ambiguous | 0.4559 | ambiguous | -1.126 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
P/F | 0.6717 | likely_pathogenic | 0.7201 | pathogenic | -1.221 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
P/G | 0.4015 | ambiguous | 0.4098 | ambiguous | -1.608 | Destabilizing | 0.997 | D | 0.709 | prob.delet. | None | None | None | None | N |
P/H | 0.4124 | ambiguous | 0.4379 | ambiguous | -1.193 | Destabilizing | 1.0 | D | 0.756 | deleterious | N | 0.493953771 | None | None | N |
P/I | 0.3113 | likely_benign | 0.3435 | ambiguous | -0.717 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
P/K | 0.5287 | ambiguous | 0.5776 | pathogenic | -1.036 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
P/L | 0.1747 | likely_benign | 0.2017 | benign | -0.717 | Destabilizing | 0.999 | D | 0.755 | deleterious | N | 0.477411372 | None | None | N |
P/M | 0.3295 | likely_benign | 0.3463 | ambiguous | -0.444 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
P/N | 0.4861 | ambiguous | 0.4975 | ambiguous | -0.692 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
P/Q | 0.3077 | likely_benign | 0.317 | benign | -0.916 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
P/R | 0.4351 | ambiguous | 0.481 | ambiguous | -0.479 | Destabilizing | 0.999 | D | 0.787 | deleterious | N | 0.476026771 | None | None | N |
P/S | 0.2105 | likely_benign | 0.2243 | benign | -1.155 | Destabilizing | 0.998 | D | 0.724 | prob.delet. | N | 0.469002517 | None | None | N |
P/T | 0.1239 | likely_benign | 0.1301 | benign | -1.094 | Destabilizing | 0.999 | D | 0.749 | deleterious | N | 0.475029795 | None | None | N |
P/V | 0.222 | likely_benign | 0.2362 | benign | -0.889 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
P/W | 0.8271 | likely_pathogenic | 0.8567 | pathogenic | -1.364 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
P/Y | 0.6665 | likely_pathogenic | 0.7094 | pathogenic | -1.089 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.