Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16494 | 49705;49706;49707 | chr2:178613803;178613802;178613801 | chr2:179478530;179478529;179478528 |
N2AB | 14853 | 44782;44783;44784 | chr2:178613803;178613802;178613801 | chr2:179478530;179478529;179478528 |
N2A | 13926 | 42001;42002;42003 | chr2:178613803;178613802;178613801 | chr2:179478530;179478529;179478528 |
N2B | 7429 | 22510;22511;22512 | chr2:178613803;178613802;178613801 | chr2:179478530;179478529;179478528 |
Novex-1 | 7554 | 22885;22886;22887 | chr2:178613803;178613802;178613801 | chr2:179478530;179478529;179478528 |
Novex-2 | 7621 | 23086;23087;23088 | chr2:178613803;178613802;178613801 | chr2:179478530;179478529;179478528 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | rs1576450617 | None | 0.062 | N | 0.279 | 0.081 | 0.225215365344 | gnomAD-4.0.0 | 1.59374E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86356E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1066 | likely_benign | 0.0958 | benign | -0.4 | Destabilizing | 0.027 | N | 0.293 | neutral | N | 0.466296708 | None | None | N |
T/C | 0.4054 | ambiguous | 0.3457 | ambiguous | -0.238 | Destabilizing | 0.824 | D | 0.289 | neutral | None | None | None | None | N |
T/D | 0.4212 | ambiguous | 0.38 | ambiguous | -0.147 | Destabilizing | 0.081 | N | 0.266 | neutral | None | None | None | None | N |
T/E | 0.4401 | ambiguous | 0.4244 | ambiguous | -0.223 | Destabilizing | 0.035 | N | 0.301 | neutral | None | None | None | None | N |
T/F | 0.4212 | ambiguous | 0.3984 | ambiguous | -0.823 | Destabilizing | 0.555 | D | 0.351 | neutral | None | None | None | None | N |
T/G | 0.1949 | likely_benign | 0.1503 | benign | -0.547 | Destabilizing | 0.081 | N | 0.26 | neutral | None | None | None | None | N |
T/H | 0.3037 | likely_benign | 0.279 | benign | -0.849 | Destabilizing | 0.001 | N | 0.221 | neutral | None | None | None | None | N |
T/I | 0.3826 | ambiguous | 0.3384 | benign | -0.129 | Destabilizing | 0.317 | N | 0.303 | neutral | D | 0.538813297 | None | None | N |
T/K | 0.335 | likely_benign | 0.3531 | ambiguous | -0.528 | Destabilizing | 0.062 | N | 0.279 | neutral | N | 0.472238645 | None | None | N |
T/L | 0.1577 | likely_benign | 0.1425 | benign | -0.129 | Destabilizing | 0.149 | N | 0.282 | neutral | None | None | None | None | N |
T/M | 0.1406 | likely_benign | 0.137 | benign | 0.134 | Stabilizing | 0.555 | D | 0.274 | neutral | None | None | None | None | N |
T/N | 0.1029 | likely_benign | 0.0909 | benign | -0.286 | Destabilizing | 0.081 | N | 0.285 | neutral | None | None | None | None | N |
T/P | 0.6226 | likely_pathogenic | 0.618 | pathogenic | -0.191 | Destabilizing | 0.317 | N | 0.297 | neutral | N | 0.469895506 | None | None | N |
T/Q | 0.3062 | likely_benign | 0.2781 | benign | -0.556 | Destabilizing | 0.002 | N | 0.23 | neutral | None | None | None | None | N |
T/R | 0.3155 | likely_benign | 0.3539 | ambiguous | -0.181 | Destabilizing | 0.062 | N | 0.299 | neutral | N | 0.468746047 | None | None | N |
T/S | 0.0869 | likely_benign | 0.0762 | benign | -0.468 | Destabilizing | None | N | 0.189 | neutral | N | 0.389816962 | None | None | N |
T/V | 0.2852 | likely_benign | 0.2396 | benign | -0.191 | Destabilizing | 0.149 | N | 0.273 | neutral | None | None | None | None | N |
T/W | 0.7283 | likely_pathogenic | 0.7233 | pathogenic | -0.818 | Destabilizing | 0.935 | D | 0.383 | neutral | None | None | None | None | N |
T/Y | 0.3985 | ambiguous | 0.3812 | ambiguous | -0.56 | Destabilizing | 0.38 | N | 0.334 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.