Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16509 | 49750;49751;49752 | chr2:178613758;178613757;178613756 | chr2:179478485;179478484;179478483 |
N2AB | 14868 | 44827;44828;44829 | chr2:178613758;178613757;178613756 | chr2:179478485;179478484;179478483 |
N2A | 13941 | 42046;42047;42048 | chr2:178613758;178613757;178613756 | chr2:179478485;179478484;179478483 |
N2B | 7444 | 22555;22556;22557 | chr2:178613758;178613757;178613756 | chr2:179478485;179478484;179478483 |
Novex-1 | 7569 | 22930;22931;22932 | chr2:178613758;178613757;178613756 | chr2:179478485;179478484;179478483 |
Novex-2 | 7636 | 23131;23132;23133 | chr2:178613758;178613757;178613756 | chr2:179478485;179478484;179478483 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs779933778 | -0.92 | 0.826 | N | 0.401 | 0.169 | 0.202086224978 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
T/S | rs779933778 | -0.92 | 0.826 | N | 0.401 | 0.169 | 0.202086224978 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94553E-04 | None | 0 | 0 | 0 | 0 | 0 |
T/S | rs779933778 | -0.92 | 0.826 | N | 0.401 | 0.169 | 0.202086224978 | gnomAD-4.0.0 | 6.57999E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.94553E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1142 | likely_benign | 0.0961 | benign | -1.044 | Destabilizing | 0.826 | D | 0.401 | neutral | N | 0.479885294 | None | None | N |
T/C | 0.5703 | likely_pathogenic | 0.3878 | ambiguous | -0.514 | Destabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | N |
T/D | 0.716 | likely_pathogenic | 0.6384 | pathogenic | -0.074 | Destabilizing | 0.884 | D | 0.398 | neutral | None | None | None | None | N |
T/E | 0.572 | likely_pathogenic | 0.4941 | ambiguous | -0.018 | Destabilizing | 0.939 | D | 0.414 | neutral | None | None | None | None | N |
T/F | 0.47 | ambiguous | 0.3931 | ambiguous | -1.037 | Destabilizing | 0.991 | D | 0.575 | neutral | None | None | None | None | N |
T/G | 0.4161 | ambiguous | 0.3159 | benign | -1.352 | Destabilizing | 0.939 | D | 0.488 | neutral | None | None | None | None | N |
T/H | 0.4202 | ambiguous | 0.3166 | benign | -1.515 | Destabilizing | 0.991 | D | 0.565 | neutral | None | None | None | None | N |
T/I | 0.2814 | likely_benign | 0.2239 | benign | -0.295 | Destabilizing | 0.852 | D | 0.435 | neutral | N | 0.515352716 | None | None | N |
T/K | 0.4221 | ambiguous | 0.3693 | ambiguous | -0.559 | Destabilizing | 0.134 | N | 0.361 | neutral | N | 0.484846742 | None | None | N |
T/L | 0.2041 | likely_benign | 0.1605 | benign | -0.295 | Destabilizing | 0.759 | D | 0.415 | neutral | None | None | None | None | N |
T/M | 0.1487 | likely_benign | 0.1217 | benign | -0.096 | Destabilizing | 0.991 | D | 0.543 | neutral | None | None | None | None | N |
T/N | 0.2151 | likely_benign | 0.1616 | benign | -0.661 | Destabilizing | 0.079 | N | 0.225 | neutral | None | None | None | None | N |
T/P | 0.7922 | likely_pathogenic | 0.7981 | pathogenic | -0.512 | Destabilizing | 0.996 | D | 0.56 | neutral | D | 0.534280391 | None | None | N |
T/Q | 0.3583 | ambiguous | 0.2777 | benign | -0.689 | Destabilizing | 0.982 | D | 0.561 | neutral | None | None | None | None | N |
T/R | 0.347 | ambiguous | 0.3302 | benign | -0.456 | Destabilizing | 0.852 | D | 0.467 | neutral | N | 0.473464937 | None | None | N |
T/S | 0.1498 | likely_benign | 0.1234 | benign | -1.017 | Destabilizing | 0.826 | D | 0.401 | neutral | N | 0.433995298 | None | None | N |
T/V | 0.1948 | likely_benign | 0.1478 | benign | -0.512 | Destabilizing | 0.17 | N | 0.29 | neutral | None | None | None | None | N |
T/W | 0.8486 | likely_pathogenic | 0.7812 | pathogenic | -0.982 | Destabilizing | 0.999 | D | 0.614 | neutral | None | None | None | None | N |
T/Y | 0.5256 | ambiguous | 0.4126 | ambiguous | -0.725 | Destabilizing | 0.997 | D | 0.576 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.