Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16520 | 49783;49784;49785 | chr2:178613251;178613250;178613249 | chr2:179477978;179477977;179477976 |
N2AB | 14879 | 44860;44861;44862 | chr2:178613251;178613250;178613249 | chr2:179477978;179477977;179477976 |
N2A | 13952 | 42079;42080;42081 | chr2:178613251;178613250;178613249 | chr2:179477978;179477977;179477976 |
N2B | 7455 | 22588;22589;22590 | chr2:178613251;178613250;178613249 | chr2:179477978;179477977;179477976 |
Novex-1 | 7580 | 22963;22964;22965 | chr2:178613251;178613250;178613249 | chr2:179477978;179477977;179477976 |
Novex-2 | 7647 | 23164;23165;23166 | chr2:178613251;178613250;178613249 | chr2:179477978;179477977;179477976 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs779658426 | -1.194 | 1.0 | N | 0.724 | 0.254 | 0.187945064343 | gnomAD-2.1.1 | 5.69E-05 | None | None | None | None | N | None | 0 | 4.10654E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/N | rs779658426 | -1.194 | 1.0 | N | 0.724 | 0.254 | 0.187945064343 | gnomAD-4.0.0 | 2.26238E-05 | None | None | None | None | N | None | 0 | 3.14861E-04 | None | 0 | 0 | None | 0 | 0 | 1.53058E-05 | 0 | 3.32127E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7847 | likely_pathogenic | 0.5494 | ambiguous | -0.533 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | N |
K/C | 0.9157 | likely_pathogenic | 0.759 | pathogenic | -0.697 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
K/D | 0.9416 | likely_pathogenic | 0.8492 | pathogenic | -0.069 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
K/E | 0.7225 | likely_pathogenic | 0.399 | ambiguous | 0.076 | Stabilizing | 0.999 | D | 0.64 | neutral | N | 0.409903678 | None | None | N |
K/F | 0.9555 | likely_pathogenic | 0.8822 | pathogenic | -0.167 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
K/G | 0.8727 | likely_pathogenic | 0.7378 | pathogenic | -0.89 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/H | 0.6591 | likely_pathogenic | 0.4609 | ambiguous | -0.885 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
K/I | 0.7374 | likely_pathogenic | 0.4809 | ambiguous | 0.398 | Stabilizing | 1.0 | D | 0.776 | deleterious | N | 0.480605805 | None | None | N |
K/L | 0.6954 | likely_pathogenic | 0.4891 | ambiguous | 0.398 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/M | 0.5381 | ambiguous | 0.2938 | benign | -0.046 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/N | 0.8202 | likely_pathogenic | 0.6468 | pathogenic | -0.585 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | N | 0.4802259 | None | None | N |
K/P | 0.8408 | likely_pathogenic | 0.6921 | pathogenic | 0.116 | Stabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
K/Q | 0.4023 | ambiguous | 0.199 | benign | -0.512 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | N | 0.47132027 | None | None | N |
K/R | 0.1354 | likely_benign | 0.1054 | benign | -0.377 | Destabilizing | 0.999 | D | 0.569 | neutral | N | 0.481222935 | None | None | N |
K/S | 0.8328 | likely_pathogenic | 0.6368 | pathogenic | -1.184 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
K/T | 0.4987 | ambiguous | 0.2522 | benign | -0.826 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.462587948 | None | None | N |
K/V | 0.6977 | likely_pathogenic | 0.435 | ambiguous | 0.116 | Stabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
K/W | 0.9341 | likely_pathogenic | 0.8335 | pathogenic | -0.123 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
K/Y | 0.8673 | likely_pathogenic | 0.7193 | pathogenic | 0.171 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.