Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16539 | 49840;49841;49842 | chr2:178613194;178613193;178613192 | chr2:179477921;179477920;179477919 |
N2AB | 14898 | 44917;44918;44919 | chr2:178613194;178613193;178613192 | chr2:179477921;179477920;179477919 |
N2A | 13971 | 42136;42137;42138 | chr2:178613194;178613193;178613192 | chr2:179477921;179477920;179477919 |
N2B | 7474 | 22645;22646;22647 | chr2:178613194;178613193;178613192 | chr2:179477921;179477920;179477919 |
Novex-1 | 7599 | 23020;23021;23022 | chr2:178613194;178613193;178613192 | chr2:179477921;179477920;179477919 |
Novex-2 | 7666 | 23221;23222;23223 | chr2:178613194;178613193;178613192 | chr2:179477921;179477920;179477919 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs1037901670 | None | 0.049 | N | 0.363 | 0.095 | 0.296679040009 | gnomAD-4.0.0 | 3.19513E-06 | None | None | None | None | N | None | 5.69671E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03711E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0787 | likely_benign | 0.0651 | benign | -0.777 | Destabilizing | None | N | 0.187 | neutral | N | 0.377949079 | None | None | N |
S/C | 0.1484 | likely_benign | 0.1178 | benign | -0.427 | Destabilizing | 0.703 | D | 0.44 | neutral | None | None | None | None | N |
S/D | 0.4725 | ambiguous | 0.3305 | benign | 0.005 | Stabilizing | 0.064 | N | 0.279 | neutral | None | None | None | None | N |
S/E | 0.483 | ambiguous | 0.3339 | benign | 0.002 | Stabilizing | None | N | 0.191 | neutral | None | None | None | None | N |
S/F | 0.4 | ambiguous | 0.3173 | benign | -0.906 | Destabilizing | 0.538 | D | 0.665 | prob.neutral | None | None | None | None | N |
S/G | 0.1486 | likely_benign | 0.1209 | benign | -1.028 | Destabilizing | 0.064 | N | 0.345 | neutral | None | None | None | None | N |
S/H | 0.5457 | ambiguous | 0.4008 | ambiguous | -1.462 | Destabilizing | 0.703 | D | 0.435 | neutral | None | None | None | None | N |
S/I | 0.2241 | likely_benign | 0.1609 | benign | -0.214 | Destabilizing | 0.001 | N | 0.395 | neutral | None | None | None | None | N |
S/K | 0.881 | likely_pathogenic | 0.7722 | pathogenic | -0.667 | Destabilizing | 0.064 | N | 0.285 | neutral | None | None | None | None | N |
S/L | 0.1939 | likely_benign | 0.1566 | benign | -0.214 | Destabilizing | 0.049 | N | 0.363 | neutral | N | 0.450266745 | None | None | N |
S/M | 0.2444 | likely_benign | 0.1744 | benign | 0.009 | Stabilizing | 0.538 | D | 0.431 | neutral | None | None | None | None | N |
S/N | 0.1691 | likely_benign | 0.1272 | benign | -0.55 | Destabilizing | 0.25 | N | 0.361 | neutral | None | None | None | None | N |
S/P | 0.1612 | likely_benign | 0.1035 | benign | -0.368 | Destabilizing | None | N | 0.279 | neutral | N | 0.361136727 | None | None | N |
S/Q | 0.6012 | likely_pathogenic | 0.4231 | ambiguous | -0.676 | Destabilizing | 0.143 | N | 0.399 | neutral | None | None | None | None | N |
S/R | 0.8717 | likely_pathogenic | 0.7845 | pathogenic | -0.595 | Destabilizing | 0.25 | N | 0.544 | neutral | None | None | None | None | N |
S/T | 0.1072 | likely_benign | 0.0886 | benign | -0.603 | Destabilizing | 0.094 | N | 0.284 | neutral | N | 0.449817458 | None | None | N |
S/V | 0.2137 | likely_benign | 0.1469 | benign | -0.368 | Destabilizing | 0.064 | N | 0.365 | neutral | None | None | None | None | N |
S/W | 0.5497 | ambiguous | 0.489 | ambiguous | -0.869 | Destabilizing | 0.964 | D | 0.693 | prob.delet. | None | None | None | None | N |
S/Y | 0.3227 | likely_benign | 0.2733 | benign | -0.62 | Destabilizing | 0.878 | D | 0.629 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.