Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16597 | 50014;50015;50016 | chr2:178612932;178612931;178612930 | chr2:179477659;179477658;179477657 |
N2AB | 14956 | 45091;45092;45093 | chr2:178612932;178612931;178612930 | chr2:179477659;179477658;179477657 |
N2A | 14029 | 42310;42311;42312 | chr2:178612932;178612931;178612930 | chr2:179477659;179477658;179477657 |
N2B | 7532 | 22819;22820;22821 | chr2:178612932;178612931;178612930 | chr2:179477659;179477658;179477657 |
Novex-1 | 7657 | 23194;23195;23196 | chr2:178612932;178612931;178612930 | chr2:179477659;179477658;179477657 |
Novex-2 | 7724 | 23395;23396;23397 | chr2:178612932;178612931;178612930 | chr2:179477659;179477658;179477657 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | None | N | 0.237 | 0.048 | 0.0986583533028 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1674 | likely_benign | 0.2258 | benign | -0.177 | Destabilizing | 0.22 | N | 0.431 | neutral | N | 0.48452877 | None | None | I |
E/C | 0.7863 | likely_pathogenic | 0.8575 | pathogenic | -0.26 | Destabilizing | 0.968 | D | 0.633 | neutral | None | None | None | None | I |
E/D | 0.0616 | likely_benign | 0.0704 | benign | -0.279 | Destabilizing | None | N | 0.237 | neutral | N | 0.451731425 | None | None | I |
E/F | 0.7393 | likely_pathogenic | 0.8197 | pathogenic | -0.078 | Destabilizing | 0.89 | D | 0.566 | neutral | None | None | None | None | I |
E/G | 0.2093 | likely_benign | 0.294 | benign | -0.336 | Destabilizing | 0.22 | N | 0.453 | neutral | N | 0.479381702 | None | None | I |
E/H | 0.4228 | ambiguous | 0.5619 | ambiguous | 0.46 | Stabilizing | 0.726 | D | 0.415 | neutral | None | None | None | None | I |
E/I | 0.369 | ambiguous | 0.448 | ambiguous | 0.197 | Stabilizing | 0.726 | D | 0.563 | neutral | None | None | None | None | I |
E/K | 0.181 | likely_benign | 0.2662 | benign | 0.291 | Stabilizing | 0.22 | N | 0.427 | neutral | N | 0.469920777 | None | None | I |
E/L | 0.4276 | ambiguous | 0.5268 | ambiguous | 0.197 | Stabilizing | 0.567 | D | 0.558 | neutral | None | None | None | None | I |
E/M | 0.5093 | ambiguous | 0.5807 | pathogenic | 0.002 | Stabilizing | 0.968 | D | 0.544 | neutral | None | None | None | None | I |
E/N | 0.1412 | likely_benign | 0.188 | benign | -0.005 | Destabilizing | 0.157 | N | 0.415 | neutral | None | None | None | None | I |
E/P | 0.832 | likely_pathogenic | 0.9019 | pathogenic | 0.091 | Stabilizing | 0.726 | D | 0.428 | neutral | None | None | None | None | I |
E/Q | 0.1681 | likely_benign | 0.2146 | benign | 0.027 | Stabilizing | 0.22 | N | 0.383 | neutral | N | 0.483649419 | None | None | I |
E/R | 0.3012 | likely_benign | 0.4431 | ambiguous | 0.603 | Stabilizing | 0.567 | D | 0.414 | neutral | None | None | None | None | I |
E/S | 0.1517 | likely_benign | 0.1999 | benign | -0.167 | Destabilizing | 0.157 | N | 0.429 | neutral | None | None | None | None | I |
E/T | 0.1931 | likely_benign | 0.2483 | benign | -0.032 | Destabilizing | 0.272 | N | 0.393 | neutral | None | None | None | None | I |
E/V | 0.2329 | likely_benign | 0.2971 | benign | 0.091 | Stabilizing | 0.667 | D | 0.481 | neutral | N | 0.481420516 | None | None | I |
E/W | 0.9135 | likely_pathogenic | 0.9536 | pathogenic | 0.029 | Stabilizing | 0.968 | D | 0.653 | neutral | None | None | None | None | I |
E/Y | 0.5498 | ambiguous | 0.684 | pathogenic | 0.155 | Stabilizing | 0.89 | D | 0.515 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.