Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16611 | 50056;50057;50058 | chr2:178612890;178612889;178612888 | chr2:179477617;179477616;179477615 |
N2AB | 14970 | 45133;45134;45135 | chr2:178612890;178612889;178612888 | chr2:179477617;179477616;179477615 |
N2A | 14043 | 42352;42353;42354 | chr2:178612890;178612889;178612888 | chr2:179477617;179477616;179477615 |
N2B | 7546 | 22861;22862;22863 | chr2:178612890;178612889;178612888 | chr2:179477617;179477616;179477615 |
Novex-1 | 7671 | 23236;23237;23238 | chr2:178612890;178612889;178612888 | chr2:179477617;179477616;179477615 |
Novex-2 | 7738 | 23437;23438;23439 | chr2:178612890;178612889;178612888 | chr2:179477617;179477616;179477615 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs758670411 | -0.954 | None | N | 0.168 | 0.055 | 0.220303561663 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.13122E-04 | None | 0 | None | 0 | 0 | 0 |
L/F | rs758670411 | -0.954 | None | N | 0.168 | 0.055 | 0.220303561663 | gnomAD-4.0.0 | 1.59379E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.79298E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1831 | likely_benign | 0.1687 | benign | -1.276 | Destabilizing | 0.016 | N | 0.409 | neutral | None | None | None | None | N |
L/C | 0.4028 | ambiguous | 0.3511 | ambiguous | -0.697 | Destabilizing | 0.676 | D | 0.537 | neutral | None | None | None | None | N |
L/D | 0.3755 | ambiguous | 0.381 | ambiguous | -0.795 | Destabilizing | 0.214 | N | 0.627 | neutral | None | None | None | None | N |
L/E | 0.2233 | likely_benign | 0.2442 | benign | -0.833 | Destabilizing | 0.038 | N | 0.581 | neutral | None | None | None | None | N |
L/F | 0.0957 | likely_benign | 0.0914 | benign | -0.955 | Destabilizing | None | N | 0.168 | neutral | N | 0.465407492 | None | None | N |
L/G | 0.4333 | ambiguous | 0.4175 | ambiguous | -1.543 | Destabilizing | 0.072 | N | 0.575 | neutral | None | None | None | None | N |
L/H | 0.149 | likely_benign | 0.1544 | benign | -0.782 | Destabilizing | 0.356 | N | 0.575 | neutral | None | None | None | None | N |
L/I | 0.0747 | likely_benign | 0.0649 | benign | -0.643 | Destabilizing | 0.006 | N | 0.388 | neutral | None | None | None | None | N |
L/K | 0.2776 | likely_benign | 0.3103 | benign | -0.908 | Destabilizing | None | N | 0.419 | neutral | None | None | None | None | N |
L/M | 0.1044 | likely_benign | 0.0931 | benign | -0.497 | Destabilizing | 0.171 | N | 0.527 | neutral | N | 0.477853043 | None | None | N |
L/N | 0.2136 | likely_benign | 0.1916 | benign | -0.63 | Destabilizing | 0.214 | N | 0.609 | neutral | None | None | None | None | N |
L/P | 0.3166 | likely_benign | 0.3165 | benign | -0.821 | Destabilizing | 0.356 | N | 0.604 | neutral | None | None | None | None | N |
L/Q | 0.124 | likely_benign | 0.1345 | benign | -0.837 | Destabilizing | 0.12 | N | 0.61 | neutral | None | None | None | None | N |
L/R | 0.1966 | likely_benign | 0.2417 | benign | -0.291 | Destabilizing | 0.12 | N | 0.626 | neutral | None | None | None | None | N |
L/S | 0.162 | likely_benign | 0.1434 | benign | -1.144 | Destabilizing | 0.029 | N | 0.523 | neutral | N | 0.443365853 | None | None | N |
L/T | 0.1304 | likely_benign | 0.1177 | benign | -1.072 | Destabilizing | 0.038 | N | 0.459 | neutral | None | None | None | None | N |
L/V | 0.0728 | likely_benign | 0.0646 | benign | -0.821 | Destabilizing | None | N | 0.163 | neutral | N | 0.399877837 | None | None | N |
L/W | 0.2232 | likely_benign | 0.2368 | benign | -1.004 | Destabilizing | 0.612 | D | 0.565 | neutral | D | 0.543102491 | None | None | N |
L/Y | 0.241 | likely_benign | 0.2385 | benign | -0.793 | Destabilizing | 0.038 | N | 0.463 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.