Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16620 | 50083;50084;50085 | chr2:178612863;178612862;178612861 | chr2:179477590;179477589;179477588 |
N2AB | 14979 | 45160;45161;45162 | chr2:178612863;178612862;178612861 | chr2:179477590;179477589;179477588 |
N2A | 14052 | 42379;42380;42381 | chr2:178612863;178612862;178612861 | chr2:179477590;179477589;179477588 |
N2B | 7555 | 22888;22889;22890 | chr2:178612863;178612862;178612861 | chr2:179477590;179477589;179477588 |
Novex-1 | 7680 | 23263;23264;23265 | chr2:178612863;178612862;178612861 | chr2:179477590;179477589;179477588 |
Novex-2 | 7747 | 23464;23465;23466 | chr2:178612863;178612862;178612861 | chr2:179477590;179477589;179477588 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.434 | N | 0.208 | 0.128 | 0.246773566709 | gnomAD-4.0.0 | 1.59388E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86208E-06 | 0 | 0 |
E/K | None | None | 0.998 | N | 0.551 | 0.413 | 0.348983352498 | gnomAD-4.0.0 | 4.10813E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49923E-06 | 1.15977E-05 | 0 |
E/V | None | None | 1.0 | N | 0.789 | 0.524 | 0.506006782367 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.317 | likely_benign | 0.383 | ambiguous | -1.179 | Destabilizing | 0.998 | D | 0.656 | neutral | N | 0.514402056 | None | None | N |
E/C | 0.9436 | likely_pathogenic | 0.9633 | pathogenic | -0.625 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/D | 0.4867 | ambiguous | 0.4764 | ambiguous | -1.171 | Destabilizing | 0.434 | N | 0.208 | neutral | N | 0.505849972 | None | None | N |
E/F | 0.9401 | likely_pathogenic | 0.9534 | pathogenic | -0.611 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
E/G | 0.4865 | ambiguous | 0.5867 | pathogenic | -1.569 | Destabilizing | 0.999 | D | 0.742 | deleterious | D | 0.54460971 | None | None | N |
E/H | 0.8439 | likely_pathogenic | 0.8878 | pathogenic | -0.893 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/I | 0.6243 | likely_pathogenic | 0.6763 | pathogenic | -0.095 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
E/K | 0.5018 | ambiguous | 0.6207 | pathogenic | -0.912 | Destabilizing | 0.998 | D | 0.551 | neutral | N | 0.473706039 | None | None | N |
E/L | 0.7006 | likely_pathogenic | 0.7499 | pathogenic | -0.095 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/M | 0.6827 | likely_pathogenic | 0.737 | pathogenic | 0.487 | Stabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/N | 0.5959 | likely_pathogenic | 0.6421 | pathogenic | -1.343 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/P | 0.8068 | likely_pathogenic | 0.8423 | pathogenic | -0.437 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
E/Q | 0.3022 | likely_benign | 0.3705 | ambiguous | -1.188 | Destabilizing | 0.999 | D | 0.655 | neutral | N | 0.483508037 | None | None | N |
E/R | 0.6524 | likely_pathogenic | 0.7636 | pathogenic | -0.65 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
E/S | 0.4484 | ambiguous | 0.5117 | ambiguous | -1.763 | Destabilizing | 0.997 | D | 0.593 | neutral | None | None | None | None | N |
E/T | 0.4153 | ambiguous | 0.4727 | ambiguous | -1.431 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
E/V | 0.3942 | ambiguous | 0.4597 | ambiguous | -0.437 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.478553306 | None | None | N |
E/W | 0.9809 | likely_pathogenic | 0.9881 | pathogenic | -0.347 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/Y | 0.8929 | likely_pathogenic | 0.9202 | pathogenic | -0.35 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.