Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16630 | 50113;50114;50115 | chr2:178612833;178612832;178612831 | chr2:179477560;179477559;179477558 |
N2AB | 14989 | 45190;45191;45192 | chr2:178612833;178612832;178612831 | chr2:179477560;179477559;179477558 |
N2A | 14062 | 42409;42410;42411 | chr2:178612833;178612832;178612831 | chr2:179477560;179477559;179477558 |
N2B | 7565 | 22918;22919;22920 | chr2:178612833;178612832;178612831 | chr2:179477560;179477559;179477558 |
Novex-1 | 7690 | 23293;23294;23295 | chr2:178612833;178612832;178612831 | chr2:179477560;179477559;179477558 |
Novex-2 | 7757 | 23494;23495;23496 | chr2:178612833;178612832;178612831 | chr2:179477560;179477559;179477558 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs374031591 | 0.228 | 0.92 | N | 0.305 | 0.151 | None | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs374031591 | 0.228 | 0.92 | N | 0.305 | 0.151 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2892 | likely_benign | 0.4274 | ambiguous | 0.076 | Stabilizing | 0.863 | D | 0.417 | neutral | None | None | None | None | I |
K/C | 0.7749 | likely_pathogenic | 0.8269 | pathogenic | -0.138 | Destabilizing | 0.999 | D | 0.433 | neutral | None | None | None | None | I |
K/D | 0.6819 | likely_pathogenic | 0.8472 | pathogenic | -0.116 | Destabilizing | 0.991 | D | 0.404 | neutral | None | None | None | None | I |
K/E | 0.2268 | likely_benign | 0.4243 | ambiguous | -0.126 | Destabilizing | 0.92 | D | 0.305 | neutral | N | 0.440501949 | None | None | I |
K/F | 0.8167 | likely_pathogenic | 0.8963 | pathogenic | -0.199 | Destabilizing | 0.991 | D | 0.473 | neutral | None | None | None | None | I |
K/G | 0.513 | ambiguous | 0.6785 | pathogenic | -0.094 | Destabilizing | 0.969 | D | 0.47 | neutral | None | None | None | None | I |
K/H | 0.446 | ambiguous | 0.5263 | ambiguous | -0.323 | Destabilizing | 0.997 | D | 0.39 | neutral | None | None | None | None | I |
K/I | 0.2917 | likely_benign | 0.4099 | ambiguous | 0.441 | Stabilizing | 0.884 | D | 0.467 | neutral | None | None | None | None | I |
K/L | 0.3446 | ambiguous | 0.4762 | ambiguous | 0.441 | Stabilizing | 0.759 | D | 0.465 | neutral | None | None | None | None | I |
K/M | 0.2575 | likely_benign | 0.3738 | ambiguous | 0.228 | Stabilizing | 0.509 | D | 0.35 | neutral | N | 0.472576123 | None | None | I |
K/N | 0.5278 | ambiguous | 0.7241 | pathogenic | 0.298 | Stabilizing | 0.988 | D | 0.309 | neutral | N | 0.480018277 | None | None | I |
K/P | 0.6258 | likely_pathogenic | 0.7609 | pathogenic | 0.345 | Stabilizing | 0.997 | D | 0.419 | neutral | None | None | None | None | I |
K/Q | 0.1751 | likely_benign | 0.2355 | benign | 0.101 | Stabilizing | 0.92 | D | 0.345 | neutral | N | 0.47597554 | None | None | I |
K/R | 0.0957 | likely_benign | 0.0994 | benign | 0.047 | Stabilizing | 0.035 | N | 0.263 | neutral | N | 0.478036071 | None | None | I |
K/S | 0.4492 | ambiguous | 0.6274 | pathogenic | -0.126 | Destabilizing | 0.969 | D | 0.303 | neutral | None | None | None | None | I |
K/T | 0.1906 | likely_benign | 0.3061 | benign | -0.004 | Destabilizing | 0.92 | D | 0.428 | neutral | N | 0.480279361 | None | None | I |
K/V | 0.2501 | likely_benign | 0.3418 | ambiguous | 0.345 | Stabilizing | 0.079 | N | 0.178 | neutral | None | None | None | None | I |
K/W | 0.8578 | likely_pathogenic | 0.9092 | pathogenic | -0.248 | Destabilizing | 0.999 | D | 0.503 | neutral | None | None | None | None | I |
K/Y | 0.7553 | likely_pathogenic | 0.84 | pathogenic | 0.112 | Stabilizing | 0.997 | D | 0.479 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.