Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16639 | 50140;50141;50142 | chr2:178612806;178612805;178612804 | chr2:179477533;179477532;179477531 |
N2AB | 14998 | 45217;45218;45219 | chr2:178612806;178612805;178612804 | chr2:179477533;179477532;179477531 |
N2A | 14071 | 42436;42437;42438 | chr2:178612806;178612805;178612804 | chr2:179477533;179477532;179477531 |
N2B | 7574 | 22945;22946;22947 | chr2:178612806;178612805;178612804 | chr2:179477533;179477532;179477531 |
Novex-1 | 7699 | 23320;23321;23322 | chr2:178612806;178612805;178612804 | chr2:179477533;179477532;179477531 |
Novex-2 | 7766 | 23521;23522;23523 | chr2:178612806;178612805;178612804 | chr2:179477533;179477532;179477531 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 0.972 | N | 0.814 | 0.278 | 0.33835085245 | gnomAD-4.0.0 | 1.20037E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31256E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1014 | likely_benign | 0.1138 | benign | -1.607 | Destabilizing | 0.908 | D | 0.726 | deleterious | N | 0.46955764 | None | None | N |
P/C | 0.7934 | likely_pathogenic | 0.8068 | pathogenic | -0.983 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
P/D | 0.6835 | likely_pathogenic | 0.7604 | pathogenic | -1.411 | Destabilizing | 0.989 | D | 0.743 | deleterious | None | None | None | None | N |
P/E | 0.5128 | ambiguous | 0.5972 | pathogenic | -1.408 | Destabilizing | 0.989 | D | 0.757 | deleterious | None | None | None | None | N |
P/F | 0.7714 | likely_pathogenic | 0.8132 | pathogenic | -1.327 | Destabilizing | 0.999 | D | 0.9 | deleterious | None | None | None | None | N |
P/G | 0.5847 | likely_pathogenic | 0.6349 | pathogenic | -1.929 | Destabilizing | 0.929 | D | 0.821 | deleterious | None | None | None | None | N |
P/H | 0.5087 | ambiguous | 0.5984 | pathogenic | -1.471 | Destabilizing | 0.999 | D | 0.858 | deleterious | N | 0.519504288 | None | None | N |
P/I | 0.4325 | ambiguous | 0.4881 | ambiguous | -0.812 | Destabilizing | 0.995 | D | 0.887 | deleterious | None | None | None | None | N |
P/K | 0.6466 | likely_pathogenic | 0.7533 | pathogenic | -1.115 | Destabilizing | 0.989 | D | 0.735 | deleterious | None | None | None | None | N |
P/L | 0.2531 | likely_benign | 0.2993 | benign | -0.812 | Destabilizing | 0.986 | D | 0.825 | deleterious | N | 0.475376751 | None | None | N |
P/M | 0.5448 | ambiguous | 0.5784 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
P/N | 0.6555 | likely_pathogenic | 0.7027 | pathogenic | -0.898 | Destabilizing | 0.989 | D | 0.86 | deleterious | None | None | None | None | N |
P/Q | 0.408 | ambiguous | 0.4885 | ambiguous | -1.09 | Destabilizing | 0.995 | D | 0.794 | deleterious | None | None | None | None | N |
P/R | 0.5026 | ambiguous | 0.6447 | pathogenic | -0.617 | Destabilizing | 0.986 | D | 0.863 | deleterious | D | 0.543471611 | None | None | N |
P/S | 0.2539 | likely_benign | 0.2954 | benign | -1.444 | Destabilizing | 0.379 | N | 0.371 | neutral | N | 0.475619714 | None | None | N |
P/T | 0.2165 | likely_benign | 0.2641 | benign | -1.331 | Destabilizing | 0.972 | D | 0.814 | deleterious | N | 0.472740015 | None | None | N |
P/V | 0.3065 | likely_benign | 0.3557 | ambiguous | -1.043 | Destabilizing | 0.989 | D | 0.834 | deleterious | None | None | None | None | N |
P/W | 0.9094 | likely_pathogenic | 0.9369 | pathogenic | -1.51 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
P/Y | 0.7527 | likely_pathogenic | 0.8049 | pathogenic | -1.212 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.