Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16676 | 50251;50252;50253 | chr2:178612499;178612498;178612497 | chr2:179477226;179477225;179477224 |
N2AB | 15035 | 45328;45329;45330 | chr2:178612499;178612498;178612497 | chr2:179477226;179477225;179477224 |
N2A | 14108 | 42547;42548;42549 | chr2:178612499;178612498;178612497 | chr2:179477226;179477225;179477224 |
N2B | 7611 | 23056;23057;23058 | chr2:178612499;178612498;178612497 | chr2:179477226;179477225;179477224 |
Novex-1 | 7736 | 23431;23432;23433 | chr2:178612499;178612498;178612497 | chr2:179477226;179477225;179477224 |
Novex-2 | 7803 | 23632;23633;23634 | chr2:178612499;178612498;178612497 | chr2:179477226;179477225;179477224 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 1.0 | N | 0.647 | 0.469 | 0.460438652622 | gnomAD-4.0.0 | 1.59497E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86251E-06 | 0 | 0 |
E/K | rs759582108 | 0.665 | 0.999 | N | 0.667 | 0.322 | 0.383921772103 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
E/K | rs759582108 | 0.665 | 0.999 | N | 0.667 | 0.322 | 0.383921772103 | gnomAD-4.0.0 | 4.78506E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.30182E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4222 | ambiguous | 0.5851 | pathogenic | -0.181 | Destabilizing | 0.999 | D | 0.651 | neutral | N | 0.475493775 | None | None | I |
E/C | 0.9805 | likely_pathogenic | 0.9894 | pathogenic | -0.197 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
E/D | 0.3168 | likely_benign | 0.3009 | benign | -0.293 | Destabilizing | 0.999 | D | 0.503 | neutral | N | 0.480675131 | None | None | I |
E/F | 0.9642 | likely_pathogenic | 0.9809 | pathogenic | -0.105 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
E/G | 0.3854 | ambiguous | 0.5637 | ambiguous | -0.335 | Destabilizing | 1.0 | D | 0.647 | neutral | N | 0.481649604 | None | None | I |
E/H | 0.884 | likely_pathogenic | 0.9355 | pathogenic | 0.395 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
E/I | 0.7793 | likely_pathogenic | 0.8678 | pathogenic | 0.18 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
E/K | 0.4735 | ambiguous | 0.6819 | pathogenic | 0.363 | Stabilizing | 0.999 | D | 0.667 | neutral | N | 0.478970995 | None | None | I |
E/L | 0.7527 | likely_pathogenic | 0.8517 | pathogenic | 0.18 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
E/M | 0.8419 | likely_pathogenic | 0.9126 | pathogenic | 0.028 | Stabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | I |
E/N | 0.6908 | likely_pathogenic | 0.7731 | pathogenic | 0.054 | Stabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
E/P | 0.8222 | likely_pathogenic | 0.8925 | pathogenic | 0.079 | Stabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
E/Q | 0.3705 | ambiguous | 0.5258 | ambiguous | 0.078 | Stabilizing | 1.0 | D | 0.639 | neutral | N | 0.467787014 | None | None | I |
E/R | 0.6326 | likely_pathogenic | 0.7952 | pathogenic | 0.633 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
E/S | 0.5073 | ambiguous | 0.6323 | pathogenic | -0.094 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | I |
E/T | 0.6174 | likely_pathogenic | 0.7419 | pathogenic | 0.037 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
E/V | 0.5637 | ambiguous | 0.7084 | pathogenic | 0.079 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | N | 0.49761147 | None | None | I |
E/W | 0.9838 | likely_pathogenic | 0.9923 | pathogenic | 0.002 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
E/Y | 0.9347 | likely_pathogenic | 0.9654 | pathogenic | 0.13 | Stabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.