Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16693 | 50302;50303;50304 | chr2:178612448;178612447;178612446 | chr2:179477175;179477174;179477173 |
N2AB | 15052 | 45379;45380;45381 | chr2:178612448;178612447;178612446 | chr2:179477175;179477174;179477173 |
N2A | 14125 | 42598;42599;42600 | chr2:178612448;178612447;178612446 | chr2:179477175;179477174;179477173 |
N2B | 7628 | 23107;23108;23109 | chr2:178612448;178612447;178612446 | chr2:179477175;179477174;179477173 |
Novex-1 | 7753 | 23482;23483;23484 | chr2:178612448;178612447;178612446 | chr2:179477175;179477174;179477173 |
Novex-2 | 7820 | 23683;23684;23685 | chr2:178612448;178612447;178612446 | chr2:179477175;179477174;179477173 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs927020149 | -1.364 | 0.099 | N | 0.235 | 0.162 | 0.392855499163 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.02E-06 | 0 |
V/A | rs927020149 | -1.364 | 0.099 | N | 0.235 | 0.162 | 0.392855499163 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/A | rs927020149 | -1.364 | 0.099 | N | 0.235 | 0.162 | 0.392855499163 | gnomAD-4.0.0 | 5.58201E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.63236E-06 | 0 | 0 |
V/I | rs377141765 | -0.524 | 0.906 | N | 0.503 | 0.162 | None | gnomAD-2.1.1 | 2.16E-05 | None | None | None | None | N | None | 0 | 2.84E-05 | None | 9.75E-05 | 0 | None | 3.27E-05 | None | 0 | 2.38E-05 | 0 |
V/I | rs377141765 | -0.524 | 0.906 | N | 0.503 | 0.162 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 4.42E-05 | 2.07211E-04 | 0 |
V/I | rs377141765 | -0.524 | 0.906 | N | 0.503 | 0.162 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
V/I | rs377141765 | -0.524 | 0.906 | N | 0.503 | 0.162 | None | gnomAD-4.0.0 | 3.53491E-05 | None | None | None | None | N | None | 0 | 3.33823E-05 | None | 3.38112E-05 | 0 | None | 0 | 0 | 4.49461E-05 | 1.09844E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6582 | likely_pathogenic | 0.5753 | pathogenic | -1.166 | Destabilizing | 0.099 | N | 0.235 | neutral | N | 0.47347114 | None | None | N |
V/C | 0.9404 | likely_pathogenic | 0.9287 | pathogenic | -0.844 | Destabilizing | 0.999 | D | 0.604 | neutral | None | None | None | None | N |
V/D | 0.9489 | likely_pathogenic | 0.9523 | pathogenic | -0.632 | Destabilizing | 0.983 | D | 0.727 | prob.delet. | N | 0.465256544 | None | None | N |
V/E | 0.871 | likely_pathogenic | 0.8858 | pathogenic | -0.675 | Destabilizing | 0.987 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/F | 0.7225 | likely_pathogenic | 0.6904 | pathogenic | -0.938 | Destabilizing | 0.987 | D | 0.587 | neutral | D | 0.544432496 | None | None | N |
V/G | 0.7552 | likely_pathogenic | 0.7202 | pathogenic | -1.425 | Destabilizing | 0.967 | D | 0.661 | neutral | N | 0.485048323 | None | None | N |
V/H | 0.9664 | likely_pathogenic | 0.9631 | pathogenic | -0.843 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/I | 0.1331 | likely_benign | 0.1107 | benign | -0.583 | Destabilizing | 0.906 | D | 0.503 | neutral | N | 0.4842543 | None | None | N |
V/K | 0.8965 | likely_pathogenic | 0.9112 | pathogenic | -0.884 | Destabilizing | 0.987 | D | 0.675 | prob.neutral | None | None | None | None | N |
V/L | 0.7151 | likely_pathogenic | 0.6272 | pathogenic | -0.583 | Destabilizing | 0.062 | N | 0.235 | neutral | N | 0.481954699 | None | None | N |
V/M | 0.5607 | ambiguous | 0.468 | ambiguous | -0.47 | Destabilizing | 0.975 | D | 0.587 | neutral | None | None | None | None | N |
V/N | 0.8577 | likely_pathogenic | 0.819 | pathogenic | -0.621 | Destabilizing | 0.996 | D | 0.732 | prob.delet. | None | None | None | None | N |
V/P | 0.915 | likely_pathogenic | 0.9156 | pathogenic | -0.741 | Destabilizing | 0.987 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/Q | 0.8579 | likely_pathogenic | 0.8555 | pathogenic | -0.837 | Destabilizing | 0.996 | D | 0.712 | prob.delet. | None | None | None | None | N |
V/R | 0.8771 | likely_pathogenic | 0.9095 | pathogenic | -0.343 | Destabilizing | 0.987 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/S | 0.7056 | likely_pathogenic | 0.6508 | pathogenic | -1.168 | Destabilizing | 0.95 | D | 0.61 | neutral | None | None | None | None | N |
V/T | 0.6028 | likely_pathogenic | 0.5245 | ambiguous | -1.105 | Destabilizing | 0.916 | D | 0.525 | neutral | None | None | None | None | N |
V/W | 0.9879 | likely_pathogenic | 0.9875 | pathogenic | -1.027 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
V/Y | 0.9444 | likely_pathogenic | 0.9442 | pathogenic | -0.756 | Destabilizing | 0.987 | D | 0.599 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.