Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16711 | 50356;50357;50358 | chr2:178612394;178612393;178612392 | chr2:179477121;179477120;179477119 |
N2AB | 15070 | 45433;45434;45435 | chr2:178612394;178612393;178612392 | chr2:179477121;179477120;179477119 |
N2A | 14143 | 42652;42653;42654 | chr2:178612394;178612393;178612392 | chr2:179477121;179477120;179477119 |
N2B | 7646 | 23161;23162;23163 | chr2:178612394;178612393;178612392 | chr2:179477121;179477120;179477119 |
Novex-1 | 7771 | 23536;23537;23538 | chr2:178612394;178612393;178612392 | chr2:179477121;179477120;179477119 |
Novex-2 | 7838 | 23737;23738;23739 | chr2:178612394;178612393;178612392 | chr2:179477121;179477120;179477119 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | None | None | 0.993 | N | 0.797 | 0.443 | 0.594705806306 | gnomAD-4.0.0 | 1.59393E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8622E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1116 | likely_benign | 0.1056 | benign | -0.523 | Destabilizing | 0.898 | D | 0.48 | neutral | D | 0.557935098 | None | None | N |
T/C | 0.5294 | ambiguous | 0.5278 | ambiguous | -0.226 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
T/D | 0.7971 | likely_pathogenic | 0.7743 | pathogenic | -0.073 | Destabilizing | 0.995 | D | 0.727 | prob.delet. | None | None | None | None | N |
T/E | 0.6764 | likely_pathogenic | 0.6172 | pathogenic | -0.141 | Destabilizing | 0.995 | D | 0.717 | prob.delet. | None | None | None | None | N |
T/F | 0.4874 | ambiguous | 0.4744 | ambiguous | -0.927 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
T/G | 0.4678 | ambiguous | 0.4554 | ambiguous | -0.686 | Destabilizing | 0.966 | D | 0.65 | neutral | None | None | None | None | N |
T/H | 0.4947 | ambiguous | 0.4511 | ambiguous | -1.038 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
T/I | 0.2272 | likely_benign | 0.2097 | benign | -0.206 | Destabilizing | 0.997 | D | 0.791 | deleterious | N | 0.483812706 | None | None | N |
T/K | 0.5269 | ambiguous | 0.4647 | ambiguous | -0.516 | Destabilizing | 0.993 | D | 0.727 | prob.delet. | N | 0.483389441 | None | None | N |
T/L | 0.1723 | likely_benign | 0.1715 | benign | -0.206 | Destabilizing | 0.983 | D | 0.619 | neutral | None | None | None | None | N |
T/M | 0.1396 | likely_benign | 0.1305 | benign | 0.135 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
T/N | 0.2249 | likely_benign | 0.2078 | benign | -0.274 | Destabilizing | 0.995 | D | 0.641 | neutral | None | None | None | None | N |
T/P | 0.2911 | likely_benign | 0.3374 | benign | -0.282 | Destabilizing | 0.997 | D | 0.797 | deleterious | D | 0.578766908 | None | None | N |
T/Q | 0.396 | ambiguous | 0.3458 | ambiguous | -0.54 | Destabilizing | 0.998 | D | 0.81 | deleterious | None | None | None | None | N |
T/R | 0.4856 | ambiguous | 0.4311 | ambiguous | -0.21 | Destabilizing | 0.993 | D | 0.797 | deleterious | N | 0.488346276 | None | None | N |
T/S | 0.1496 | likely_benign | 0.1415 | benign | -0.487 | Destabilizing | 0.362 | N | 0.316 | neutral | D | 0.52288301 | None | None | N |
T/V | 0.1463 | likely_benign | 0.1453 | benign | -0.282 | Destabilizing | 0.983 | D | 0.525 | neutral | None | None | None | None | N |
T/W | 0.8723 | likely_pathogenic | 0.8711 | pathogenic | -0.895 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
T/Y | 0.634 | likely_pathogenic | 0.6151 | pathogenic | -0.639 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.