Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16713 | 50362;50363;50364 | chr2:178612388;178612387;178612386 | chr2:179477115;179477114;179477113 |
N2AB | 15072 | 45439;45440;45441 | chr2:178612388;178612387;178612386 | chr2:179477115;179477114;179477113 |
N2A | 14145 | 42658;42659;42660 | chr2:178612388;178612387;178612386 | chr2:179477115;179477114;179477113 |
N2B | 7648 | 23167;23168;23169 | chr2:178612388;178612387;178612386 | chr2:179477115;179477114;179477113 |
Novex-1 | 7773 | 23542;23543;23544 | chr2:178612388;178612387;178612386 | chr2:179477115;179477114;179477113 |
Novex-2 | 7840 | 23743;23744;23745 | chr2:178612388;178612387;178612386 | chr2:179477115;179477114;179477113 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs2056496324 | None | 0.782 | D | 0.712 | 0.303 | 0.56380075071 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs2056496324 | None | 0.782 | D | 0.712 | 0.303 | 0.56380075071 | gnomAD-4.0.0 | 6.58233E-06 | None | None | None | None | N | None | 0 | 6.55824E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.129 | likely_benign | 0.1438 | benign | -0.545 | Destabilizing | 0.013 | N | 0.243 | neutral | N | 0.504753745 | None | None | N |
T/C | 0.5999 | likely_pathogenic | 0.6951 | pathogenic | -0.33 | Destabilizing | 0.973 | D | 0.711 | prob.delet. | None | None | None | None | N |
T/D | 0.7184 | likely_pathogenic | 0.8256 | pathogenic | 0.102 | Stabilizing | 0.826 | D | 0.669 | neutral | None | None | None | None | N |
T/E | 0.6735 | likely_pathogenic | 0.7524 | pathogenic | 0.058 | Stabilizing | 0.404 | N | 0.605 | neutral | None | None | None | None | N |
T/F | 0.3686 | ambiguous | 0.4686 | ambiguous | -0.818 | Destabilizing | 0.906 | D | 0.767 | deleterious | None | None | None | None | N |
T/G | 0.2998 | likely_benign | 0.3676 | ambiguous | -0.739 | Destabilizing | 0.404 | N | 0.584 | neutral | None | None | None | None | N |
T/H | 0.4755 | ambiguous | 0.5526 | ambiguous | -0.997 | Destabilizing | 0.973 | D | 0.747 | deleterious | None | None | None | None | N |
T/I | 0.3035 | likely_benign | 0.3684 | ambiguous | -0.139 | Destabilizing | 0.782 | D | 0.712 | prob.delet. | D | 0.548299866 | None | None | N |
T/K | 0.5388 | ambiguous | 0.6679 | pathogenic | -0.555 | Destabilizing | 0.404 | N | 0.618 | neutral | None | None | None | None | N |
T/L | 0.1437 | likely_benign | 0.1731 | benign | -0.139 | Destabilizing | 0.575 | D | 0.543 | neutral | None | None | None | None | N |
T/M | 0.139 | likely_benign | 0.1382 | benign | 0.04 | Stabilizing | 0.991 | D | 0.713 | prob.delet. | None | None | None | None | N |
T/N | 0.1875 | likely_benign | 0.2164 | benign | -0.361 | Destabilizing | 0.642 | D | 0.549 | neutral | N | 0.472471974 | None | None | N |
T/P | 0.3021 | likely_benign | 0.3975 | ambiguous | -0.243 | Destabilizing | 0.879 | D | 0.724 | prob.delet. | N | 0.485417776 | None | None | N |
T/Q | 0.4256 | ambiguous | 0.482 | ambiguous | -0.553 | Destabilizing | 0.826 | D | 0.73 | prob.delet. | None | None | None | None | N |
T/R | 0.5724 | likely_pathogenic | 0.6937 | pathogenic | -0.28 | Destabilizing | 0.826 | D | 0.724 | prob.delet. | None | None | None | None | N |
T/S | 0.1149 | likely_benign | 0.1194 | benign | -0.613 | Destabilizing | 0.003 | N | 0.206 | neutral | N | 0.455335788 | None | None | N |
T/V | 0.2195 | likely_benign | 0.26 | benign | -0.243 | Destabilizing | 0.575 | D | 0.439 | neutral | None | None | None | None | N |
T/W | 0.8211 | likely_pathogenic | 0.8926 | pathogenic | -0.788 | Destabilizing | 0.991 | D | 0.728 | prob.delet. | None | None | None | None | N |
T/Y | 0.4822 | ambiguous | 0.6121 | pathogenic | -0.539 | Destabilizing | 0.967 | D | 0.764 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.