Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16721 | 50386;50387;50388 | chr2:178612364;178612363;178612362 | chr2:179477091;179477090;179477089 |
N2AB | 15080 | 45463;45464;45465 | chr2:178612364;178612363;178612362 | chr2:179477091;179477090;179477089 |
N2A | 14153 | 42682;42683;42684 | chr2:178612364;178612363;178612362 | chr2:179477091;179477090;179477089 |
N2B | 7656 | 23191;23192;23193 | chr2:178612364;178612363;178612362 | chr2:179477091;179477090;179477089 |
Novex-1 | 7781 | 23566;23567;23568 | chr2:178612364;178612363;178612362 | chr2:179477091;179477090;179477089 |
Novex-2 | 7848 | 23767;23768;23769 | chr2:178612364;178612363;178612362 | chr2:179477091;179477090;179477089 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.863 | 0.884 | 0.926672064637 | gnomAD-4.0.0 | 1.36945E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79979E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9937 | likely_pathogenic | 0.9945 | pathogenic | -3.033 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Y/C | 0.9294 | likely_pathogenic | 0.9482 | pathogenic | -1.803 | Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.774651026 | None | None | N |
Y/D | 0.9978 | likely_pathogenic | 0.9983 | pathogenic | -2.942 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.805686645 | None | None | N |
Y/E | 0.9992 | likely_pathogenic | 0.9993 | pathogenic | -2.738 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
Y/F | 0.2621 | likely_benign | 0.2896 | benign | -1.061 | Destabilizing | 0.999 | D | 0.757 | deleterious | D | 0.645266637 | None | None | N |
Y/G | 0.9902 | likely_pathogenic | 0.9902 | pathogenic | -3.451 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
Y/H | 0.9736 | likely_pathogenic | 0.9815 | pathogenic | -1.966 | Destabilizing | 1.0 | D | 0.824 | deleterious | D | 0.774651026 | None | None | N |
Y/I | 0.969 | likely_pathogenic | 0.9705 | pathogenic | -1.656 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Y/K | 0.9991 | likely_pathogenic | 0.9994 | pathogenic | -1.933 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
Y/L | 0.9278 | likely_pathogenic | 0.928 | pathogenic | -1.656 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
Y/M | 0.9796 | likely_pathogenic | 0.9843 | pathogenic | -1.508 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Y/N | 0.9813 | likely_pathogenic | 0.9847 | pathogenic | -2.624 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.806001082 | None | None | N |
Y/P | 0.9987 | likely_pathogenic | 0.9983 | pathogenic | -2.128 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
Y/Q | 0.9982 | likely_pathogenic | 0.9987 | pathogenic | -2.402 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Y/R | 0.9968 | likely_pathogenic | 0.9973 | pathogenic | -1.672 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
Y/S | 0.983 | likely_pathogenic | 0.9844 | pathogenic | -3.089 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.805686645 | None | None | N |
Y/T | 0.9936 | likely_pathogenic | 0.994 | pathogenic | -2.763 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
Y/V | 0.9393 | likely_pathogenic | 0.9379 | pathogenic | -2.128 | Highly Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
Y/W | 0.8485 | likely_pathogenic | 0.8859 | pathogenic | -0.303 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.