Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16739 | 50440;50441;50442 | chr2:178612310;178612309;178612308 | chr2:179477037;179477036;179477035 |
N2AB | 15098 | 45517;45518;45519 | chr2:178612310;178612309;178612308 | chr2:179477037;179477036;179477035 |
N2A | 14171 | 42736;42737;42738 | chr2:178612310;178612309;178612308 | chr2:179477037;179477036;179477035 |
N2B | 7674 | 23245;23246;23247 | chr2:178612310;178612309;178612308 | chr2:179477037;179477036;179477035 |
Novex-1 | 7799 | 23620;23621;23622 | chr2:178612310;178612309;178612308 | chr2:179477037;179477036;179477035 |
Novex-2 | 7866 | 23821;23822;23823 | chr2:178612310;178612309;178612308 | chr2:179477037;179477036;179477035 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1553698265 | None | None | N | 0.212 | 0.064 | 0.21737058555 | gnomAD-4.0.0 | 1.59395E-06 | None | None | None | None | N | None | 5.67472E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3765 | ambiguous | 0.3898 | ambiguous | -2.035 | Highly Destabilizing | 0.016 | N | 0.648 | neutral | None | None | None | None | N |
I/C | 0.8094 | likely_pathogenic | 0.8034 | pathogenic | -1.3 | Destabilizing | 0.685 | D | 0.657 | prob.neutral | None | None | None | None | N |
I/D | 0.9196 | likely_pathogenic | 0.9515 | pathogenic | -1.807 | Destabilizing | 0.366 | N | 0.796 | deleterious | None | None | None | None | N |
I/E | 0.8412 | likely_pathogenic | 0.891 | pathogenic | -1.686 | Destabilizing | 0.366 | N | 0.791 | deleterious | None | None | None | None | N |
I/F | 0.4623 | ambiguous | 0.5065 | ambiguous | -1.18 | Destabilizing | 0.177 | N | 0.715 | prob.delet. | N | 0.473014083 | None | None | N |
I/G | 0.7781 | likely_pathogenic | 0.8066 | pathogenic | -2.482 | Highly Destabilizing | 0.366 | N | 0.781 | deleterious | None | None | None | None | N |
I/H | 0.8939 | likely_pathogenic | 0.9219 | pathogenic | -1.784 | Destabilizing | 0.869 | D | 0.767 | deleterious | None | None | None | None | N |
I/K | 0.7715 | likely_pathogenic | 0.8614 | pathogenic | -1.566 | Destabilizing | 0.366 | N | 0.784 | deleterious | None | None | None | None | N |
I/L | 0.1237 | likely_benign | 0.1392 | benign | -0.808 | Destabilizing | None | N | 0.209 | neutral | N | 0.415418346 | None | None | N |
I/M | 0.1206 | likely_benign | 0.1398 | benign | -0.703 | Destabilizing | 0.177 | N | 0.691 | prob.delet. | N | 0.474131129 | None | None | N |
I/N | 0.5708 | likely_pathogenic | 0.6561 | pathogenic | -1.61 | Destabilizing | 0.57 | D | 0.796 | deleterious | N | 0.474777637 | None | None | N |
I/P | 0.9288 | likely_pathogenic | 0.9357 | pathogenic | -1.19 | Destabilizing | 0.637 | D | 0.792 | deleterious | None | None | None | None | N |
I/Q | 0.7713 | likely_pathogenic | 0.8372 | pathogenic | -1.625 | Destabilizing | 0.637 | D | 0.775 | deleterious | None | None | None | None | N |
I/R | 0.7274 | likely_pathogenic | 0.8312 | pathogenic | -1.12 | Destabilizing | 0.366 | N | 0.792 | deleterious | None | None | None | None | N |
I/S | 0.4774 | ambiguous | 0.5256 | ambiguous | -2.281 | Highly Destabilizing | 0.058 | N | 0.715 | prob.delet. | N | 0.463282917 | None | None | N |
I/T | 0.1531 | likely_benign | 0.169 | benign | -2.031 | Highly Destabilizing | 0.03 | N | 0.721 | deleterious | N | 0.430885089 | None | None | N |
I/V | 0.0797 | likely_benign | 0.0665 | benign | -1.19 | Destabilizing | None | N | 0.212 | neutral | N | 0.453370261 | None | None | N |
I/W | 0.9442 | likely_pathogenic | 0.9669 | pathogenic | -1.426 | Destabilizing | 0.869 | D | 0.781 | deleterious | None | None | None | None | N |
I/Y | 0.8733 | likely_pathogenic | 0.9073 | pathogenic | -1.152 | Destabilizing | 0.366 | N | 0.77 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.