Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16743 | 50452;50453;50454 | chr2:178612298;178612297;178612296 | chr2:179477025;179477024;179477023 |
N2AB | 15102 | 45529;45530;45531 | chr2:178612298;178612297;178612296 | chr2:179477025;179477024;179477023 |
N2A | 14175 | 42748;42749;42750 | chr2:178612298;178612297;178612296 | chr2:179477025;179477024;179477023 |
N2B | 7678 | 23257;23258;23259 | chr2:178612298;178612297;178612296 | chr2:179477025;179477024;179477023 |
Novex-1 | 7803 | 23632;23633;23634 | chr2:178612298;178612297;178612296 | chr2:179477025;179477024;179477023 |
Novex-2 | 7870 | 23833;23834;23835 | chr2:178612298;178612297;178612296 | chr2:179477025;179477024;179477023 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.994 | D | 0.649 | 0.315 | 0.483301346737 | gnomAD-4.0.0 | 1.59407E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.79127E-05 | None | 0 | 0 | 0 | 0 | 0 |
V/M | None | None | 0.999 | D | 0.749 | 0.353 | 0.528662862717 | gnomAD-4.0.0 | 1.59407E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.79127E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8219 | likely_pathogenic | 0.7783 | pathogenic | -1.373 | Destabilizing | 0.997 | D | 0.672 | prob.neutral | D | 0.717403803 | None | None | N |
V/C | 0.9268 | likely_pathogenic | 0.9257 | pathogenic | -0.893 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
V/D | 0.9864 | likely_pathogenic | 0.9807 | pathogenic | -1.296 | Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | N |
V/E | 0.938 | likely_pathogenic | 0.928 | pathogenic | -1.105 | Destabilizing | 0.999 | D | 0.89 | deleterious | D | 0.681370389 | None | None | N |
V/F | 0.6217 | likely_pathogenic | 0.5762 | pathogenic | -0.743 | Destabilizing | 0.999 | D | 0.88 | deleterious | None | None | None | None | N |
V/G | 0.939 | likely_pathogenic | 0.9182 | pathogenic | -1.84 | Destabilizing | 0.999 | D | 0.853 | deleterious | D | 0.71840213 | None | None | N |
V/H | 0.9704 | likely_pathogenic | 0.9651 | pathogenic | -1.299 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/I | 0.0997 | likely_benign | 0.0999 | benign | -0.106 | Destabilizing | 0.995 | D | 0.644 | neutral | None | None | None | None | N |
V/K | 0.9207 | likely_pathogenic | 0.9136 | pathogenic | -1.035 | Destabilizing | 0.999 | D | 0.892 | deleterious | None | None | None | None | N |
V/L | 0.5909 | likely_pathogenic | 0.5663 | pathogenic | -0.106 | Destabilizing | 0.994 | D | 0.649 | prob.neutral | D | 0.548662481 | None | None | N |
V/M | 0.5352 | ambiguous | 0.4904 | ambiguous | -0.188 | Destabilizing | 0.999 | D | 0.749 | deleterious | D | 0.629346309 | None | None | N |
V/N | 0.9526 | likely_pathogenic | 0.9401 | pathogenic | -1.365 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
V/P | 0.9911 | likely_pathogenic | 0.9876 | pathogenic | -0.499 | Destabilizing | 0.999 | D | 0.886 | deleterious | None | None | None | None | N |
V/Q | 0.8886 | likely_pathogenic | 0.8767 | pathogenic | -1.195 | Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
V/R | 0.9035 | likely_pathogenic | 0.8945 | pathogenic | -0.934 | Destabilizing | 0.999 | D | 0.844 | deleterious | None | None | None | None | N |
V/S | 0.9105 | likely_pathogenic | 0.8826 | pathogenic | -1.993 | Destabilizing | 0.999 | D | 0.88 | deleterious | None | None | None | None | N |
V/T | 0.7381 | likely_pathogenic | 0.7063 | pathogenic | -1.648 | Destabilizing | 0.998 | D | 0.654 | prob.neutral | None | None | None | None | N |
V/W | 0.9911 | likely_pathogenic | 0.9899 | pathogenic | -1.109 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/Y | 0.9459 | likely_pathogenic | 0.9347 | pathogenic | -0.685 | Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.