Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16762 | 50509;50510;50511 | chr2:178612127;178612126;178612125 | chr2:179476854;179476853;179476852 |
N2AB | 15121 | 45586;45587;45588 | chr2:178612127;178612126;178612125 | chr2:179476854;179476853;179476852 |
N2A | 14194 | 42805;42806;42807 | chr2:178612127;178612126;178612125 | chr2:179476854;179476853;179476852 |
N2B | 7697 | 23314;23315;23316 | chr2:178612127;178612126;178612125 | chr2:179476854;179476853;179476852 |
Novex-1 | 7822 | 23689;23690;23691 | chr2:178612127;178612126;178612125 | chr2:179476854;179476853;179476852 |
Novex-2 | 7889 | 23890;23891;23892 | chr2:178612127;178612126;178612125 | chr2:179476854;179476853;179476852 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.801 | N | 0.393 | 0.282 | 0.299427821978 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2568 | likely_benign | 0.4106 | ambiguous | -0.513 | Destabilizing | 0.022 | N | 0.197 | neutral | N | 0.475937532 | None | None | N |
D/C | 0.8423 | likely_pathogenic | 0.9046 | pathogenic | -0.268 | Destabilizing | 0.998 | D | 0.494 | neutral | None | None | None | None | N |
D/E | 0.1896 | likely_benign | 0.2671 | benign | -0.664 | Destabilizing | 0.005 | N | 0.061 | neutral | N | 0.427326764 | None | None | N |
D/F | 0.8504 | likely_pathogenic | 0.9228 | pathogenic | -0.226 | Destabilizing | 0.991 | D | 0.5 | neutral | None | None | None | None | N |
D/G | 0.2467 | likely_benign | 0.3766 | ambiguous | -0.819 | Destabilizing | 0.801 | D | 0.333 | neutral | N | 0.482006806 | None | None | N |
D/H | 0.5376 | ambiguous | 0.6722 | pathogenic | -0.479 | Destabilizing | 0.966 | D | 0.403 | neutral | N | 0.51470875 | None | None | N |
D/I | 0.7639 | likely_pathogenic | 0.8859 | pathogenic | 0.281 | Stabilizing | 0.974 | D | 0.491 | neutral | None | None | None | None | N |
D/K | 0.6526 | likely_pathogenic | 0.7876 | pathogenic | -0.48 | Destabilizing | 0.728 | D | 0.332 | neutral | None | None | None | None | N |
D/L | 0.6807 | likely_pathogenic | 0.8183 | pathogenic | 0.281 | Stabilizing | 0.842 | D | 0.431 | neutral | None | None | None | None | N |
D/M | 0.8348 | likely_pathogenic | 0.9162 | pathogenic | 0.607 | Stabilizing | 0.998 | D | 0.489 | neutral | None | None | None | None | N |
D/N | 0.1539 | likely_benign | 0.22 | benign | -0.805 | Destabilizing | 0.801 | D | 0.393 | neutral | N | 0.474056836 | None | None | N |
D/P | 0.9778 | likely_pathogenic | 0.9883 | pathogenic | 0.041 | Stabilizing | 0.974 | D | 0.365 | neutral | None | None | None | None | N |
D/Q | 0.5293 | ambiguous | 0.6833 | pathogenic | -0.691 | Destabilizing | 0.904 | D | 0.339 | neutral | None | None | None | None | N |
D/R | 0.6616 | likely_pathogenic | 0.7891 | pathogenic | -0.267 | Destabilizing | 0.949 | D | 0.414 | neutral | None | None | None | None | N |
D/S | 0.1738 | likely_benign | 0.2728 | benign | -0.995 | Destabilizing | 0.728 | D | 0.307 | neutral | None | None | None | None | N |
D/T | 0.4185 | ambiguous | 0.5968 | pathogenic | -0.759 | Destabilizing | 0.842 | D | 0.353 | neutral | None | None | None | None | N |
D/V | 0.5304 | ambiguous | 0.7161 | pathogenic | 0.041 | Stabilizing | 0.801 | D | 0.427 | neutral | N | 0.472370986 | None | None | N |
D/W | 0.9689 | likely_pathogenic | 0.9835 | pathogenic | -0.085 | Destabilizing | 0.998 | D | 0.607 | neutral | None | None | None | None | N |
D/Y | 0.5763 | likely_pathogenic | 0.7259 | pathogenic | -0.024 | Destabilizing | 0.989 | D | 0.498 | neutral | N | 0.51470875 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.