Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16784 | 50575;50576;50577 | chr2:178612061;178612060;178612059 | chr2:179476788;179476787;179476786 |
N2AB | 15143 | 45652;45653;45654 | chr2:178612061;178612060;178612059 | chr2:179476788;179476787;179476786 |
N2A | 14216 | 42871;42872;42873 | chr2:178612061;178612060;178612059 | chr2:179476788;179476787;179476786 |
N2B | 7719 | 23380;23381;23382 | chr2:178612061;178612060;178612059 | chr2:179476788;179476787;179476786 |
Novex-1 | 7844 | 23755;23756;23757 | chr2:178612061;178612060;178612059 | chr2:179476788;179476787;179476786 |
Novex-2 | 7911 | 23956;23957;23958 | chr2:178612061;178612060;178612059 | chr2:179476788;179476787;179476786 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.989 | N | 0.377 | 0.201 | 0.33085137897 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
Q/R | rs765976576 | 0.164 | 0.891 | N | 0.267 | 0.146 | 0.183819452728 | gnomAD-2.1.1 | 4.12E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.6909E-04 |
Q/R | rs765976576 | 0.164 | 0.891 | N | 0.267 | 0.146 | 0.183819452728 | gnomAD-4.0.0 | 1.60291E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.04044E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2423 | likely_benign | 0.2296 | benign | -0.483 | Destabilizing | 0.688 | D | 0.397 | neutral | None | None | None | None | I |
Q/C | 0.6989 | likely_pathogenic | 0.6542 | pathogenic | 0.112 | Stabilizing | 0.998 | D | 0.328 | neutral | None | None | None | None | I |
Q/D | 0.6211 | likely_pathogenic | 0.5878 | pathogenic | -0.465 | Destabilizing | 0.971 | D | 0.319 | neutral | None | None | None | None | I |
Q/E | 0.1188 | likely_benign | 0.1213 | benign | -0.407 | Destabilizing | 0.911 | D | 0.307 | neutral | N | 0.438596439 | None | None | I |
Q/F | 0.6999 | likely_pathogenic | 0.6928 | pathogenic | -0.201 | Destabilizing | 0.949 | D | 0.371 | neutral | None | None | None | None | I |
Q/G | 0.3552 | ambiguous | 0.3322 | benign | -0.81 | Destabilizing | 0.971 | D | 0.34 | neutral | None | None | None | None | I |
Q/H | 0.2802 | likely_benign | 0.263 | benign | -0.77 | Destabilizing | 0.989 | D | 0.377 | neutral | N | 0.48325452 | None | None | I |
Q/I | 0.2999 | likely_benign | 0.3051 | benign | 0.335 | Stabilizing | 0.728 | D | 0.372 | neutral | None | None | None | None | I |
Q/K | 0.1315 | likely_benign | 0.1295 | benign | -0.423 | Destabilizing | 0.891 | D | 0.269 | neutral | N | 0.434791918 | None | None | I |
Q/L | 0.0964 | likely_benign | 0.0906 | benign | 0.335 | Stabilizing | 0.002 | N | 0.141 | neutral | N | 0.356719741 | None | None | I |
Q/M | 0.3229 | likely_benign | 0.3029 | benign | 0.735 | Stabilizing | 0.949 | D | 0.378 | neutral | None | None | None | None | I |
Q/N | 0.3326 | likely_benign | 0.3118 | benign | -0.762 | Destabilizing | 0.971 | D | 0.343 | neutral | None | None | None | None | I |
Q/P | 0.702 | likely_pathogenic | 0.6483 | pathogenic | 0.094 | Stabilizing | 0.989 | D | 0.39 | neutral | N | 0.477860013 | None | None | I |
Q/R | 0.166 | likely_benign | 0.2036 | benign | -0.352 | Destabilizing | 0.891 | D | 0.267 | neutral | N | 0.460676164 | None | None | I |
Q/S | 0.2368 | likely_benign | 0.2233 | benign | -0.816 | Destabilizing | 0.915 | D | 0.255 | neutral | None | None | None | None | I |
Q/T | 0.1558 | likely_benign | 0.1503 | benign | -0.583 | Destabilizing | 0.915 | D | 0.327 | neutral | None | None | None | None | I |
Q/V | 0.2133 | likely_benign | 0.2013 | benign | 0.094 | Stabilizing | 0.525 | D | 0.327 | neutral | None | None | None | None | I |
Q/W | 0.7171 | likely_pathogenic | 0.6978 | pathogenic | -0.115 | Destabilizing | 0.998 | D | 0.33 | neutral | None | None | None | None | I |
Q/Y | 0.5526 | ambiguous | 0.5332 | ambiguous | 0.08 | Stabilizing | 0.974 | D | 0.401 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.