Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16814 | 50665;50666;50667 | chr2:178611869;178611868;178611867 | chr2:179476596;179476595;179476594 |
N2AB | 15173 | 45742;45743;45744 | chr2:178611869;178611868;178611867 | chr2:179476596;179476595;179476594 |
N2A | 14246 | 42961;42962;42963 | chr2:178611869;178611868;178611867 | chr2:179476596;179476595;179476594 |
N2B | 7749 | 23470;23471;23472 | chr2:178611869;178611868;178611867 | chr2:179476596;179476595;179476594 |
Novex-1 | 7874 | 23845;23846;23847 | chr2:178611869;178611868;178611867 | chr2:179476596;179476595;179476594 |
Novex-2 | 7941 | 24046;24047;24048 | chr2:178611869;178611868;178611867 | chr2:179476596;179476595;179476594 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 1.0 | D | 0.798 | 0.473 | 0.55999961142 | gnomAD-4.0.0 | 6.84561E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9981E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2147 | likely_benign | 0.215 | benign | -0.463 | Destabilizing | 0.999 | D | 0.53 | neutral | N | 0.519595938 | None | None | N |
T/C | 0.8052 | likely_pathogenic | 0.7325 | pathogenic | -0.396 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
T/D | 0.7359 | likely_pathogenic | 0.7672 | pathogenic | 0.093 | Stabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
T/E | 0.651 | likely_pathogenic | 0.6883 | pathogenic | 0.054 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
T/F | 0.6702 | likely_pathogenic | 0.6614 | pathogenic | -0.721 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
T/G | 0.4861 | ambiguous | 0.4891 | ambiguous | -0.657 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
T/H | 0.627 | likely_pathogenic | 0.5956 | pathogenic | -0.856 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
T/I | 0.5166 | ambiguous | 0.528 | ambiguous | -0.059 | Destabilizing | 1.0 | D | 0.798 | deleterious | D | 0.522576938 | None | None | N |
T/K | 0.4825 | ambiguous | 0.4981 | ambiguous | -0.566 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
T/L | 0.246 | likely_benign | 0.236 | benign | -0.059 | Destabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | N |
T/M | 0.1852 | likely_benign | 0.1772 | benign | -0.022 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
T/N | 0.293 | likely_benign | 0.3048 | benign | -0.406 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.504549327 | None | None | N |
T/P | 0.3054 | likely_benign | 0.3112 | benign | -0.163 | Destabilizing | 1.0 | D | 0.806 | deleterious | N | 0.473673009 | None | None | N |
T/Q | 0.4846 | ambiguous | 0.4938 | ambiguous | -0.568 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
T/R | 0.4422 | ambiguous | 0.4532 | ambiguous | -0.283 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
T/S | 0.236 | likely_benign | 0.2339 | benign | -0.639 | Destabilizing | 0.999 | D | 0.495 | neutral | N | 0.481788515 | None | None | N |
T/V | 0.3678 | ambiguous | 0.3614 | ambiguous | -0.163 | Destabilizing | 0.999 | D | 0.541 | neutral | None | None | None | None | N |
T/W | 0.8779 | likely_pathogenic | 0.8698 | pathogenic | -0.721 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
T/Y | 0.7308 | likely_pathogenic | 0.7281 | pathogenic | -0.461 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.