Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16821 | 50686;50687;50688 | chr2:178611848;178611847;178611846 | chr2:179476575;179476574;179476573 |
N2AB | 15180 | 45763;45764;45765 | chr2:178611848;178611847;178611846 | chr2:179476575;179476574;179476573 |
N2A | 14253 | 42982;42983;42984 | chr2:178611848;178611847;178611846 | chr2:179476575;179476574;179476573 |
N2B | 7756 | 23491;23492;23493 | chr2:178611848;178611847;178611846 | chr2:179476575;179476574;179476573 |
Novex-1 | 7881 | 23866;23867;23868 | chr2:178611848;178611847;178611846 | chr2:179476575;179476574;179476573 |
Novex-2 | 7948 | 24067;24068;24069 | chr2:178611848;178611847;178611846 | chr2:179476575;179476574;179476573 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs781091773 | -1.592 | 0.477 | D | 0.633 | 0.31 | 0.380730819819 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
E/G | rs781091773 | -1.592 | 0.477 | D | 0.633 | 0.31 | 0.380730819819 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs781091773 | -1.592 | 0.477 | D | 0.633 | 0.31 | 0.380730819819 | gnomAD-4.0.0 | 1.36402E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.86551E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.391 | ambiguous | 0.3363 | benign | -0.823 | Destabilizing | 0.477 | N | 0.554 | neutral | N | 0.508034959 | None | None | N |
E/C | 0.9694 | likely_pathogenic | 0.9549 | pathogenic | -0.302 | Destabilizing | 0.985 | D | 0.746 | deleterious | None | None | None | None | N |
E/D | 0.193 | likely_benign | 0.1877 | benign | -0.79 | Destabilizing | 0.006 | N | 0.241 | neutral | N | 0.503175829 | None | None | N |
E/F | 0.9514 | likely_pathogenic | 0.9306 | pathogenic | -0.353 | Destabilizing | 0.945 | D | 0.79 | deleterious | None | None | None | None | N |
E/G | 0.6083 | likely_pathogenic | 0.5372 | ambiguous | -1.134 | Destabilizing | 0.477 | N | 0.633 | neutral | D | 0.578653203 | None | None | N |
E/H | 0.8421 | likely_pathogenic | 0.7798 | pathogenic | -0.459 | Destabilizing | 0.985 | D | 0.627 | neutral | None | None | None | None | N |
E/I | 0.7521 | likely_pathogenic | 0.7216 | pathogenic | 0.009 | Stabilizing | 0.894 | D | 0.803 | deleterious | None | None | None | None | N |
E/K | 0.5549 | ambiguous | 0.4402 | ambiguous | -0.129 | Destabilizing | 0.477 | N | 0.479 | neutral | N | 0.48097056 | None | None | N |
E/L | 0.7716 | likely_pathogenic | 0.7284 | pathogenic | 0.009 | Stabilizing | 0.894 | D | 0.757 | deleterious | None | None | None | None | N |
E/M | 0.7606 | likely_pathogenic | 0.7194 | pathogenic | 0.352 | Stabilizing | 0.995 | D | 0.755 | deleterious | None | None | None | None | N |
E/N | 0.5796 | likely_pathogenic | 0.5193 | ambiguous | -0.65 | Destabilizing | 0.547 | D | 0.567 | neutral | None | None | None | None | N |
E/P | 0.92 | likely_pathogenic | 0.9237 | pathogenic | -0.247 | Destabilizing | 0.945 | D | 0.783 | deleterious | None | None | None | None | N |
E/Q | 0.3428 | ambiguous | 0.2781 | benign | -0.56 | Destabilizing | 0.864 | D | 0.611 | neutral | N | 0.473009857 | None | None | N |
E/R | 0.7387 | likely_pathogenic | 0.6504 | pathogenic | 0.109 | Stabilizing | 0.894 | D | 0.651 | neutral | None | None | None | None | N |
E/S | 0.4605 | ambiguous | 0.4037 | ambiguous | -0.884 | Destabilizing | 0.007 | N | 0.348 | neutral | None | None | None | None | N |
E/T | 0.5323 | ambiguous | 0.4779 | ambiguous | -0.62 | Destabilizing | 0.547 | D | 0.655 | neutral | None | None | None | None | N |
E/V | 0.5154 | ambiguous | 0.47 | ambiguous | -0.247 | Destabilizing | 0.864 | D | 0.742 | deleterious | N | 0.499450818 | None | None | N |
E/W | 0.9845 | likely_pathogenic | 0.9783 | pathogenic | -0.056 | Destabilizing | 0.995 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/Y | 0.9179 | likely_pathogenic | 0.8906 | pathogenic | -0.072 | Destabilizing | 0.945 | D | 0.782 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.