Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16840 | 50743;50744;50745 | chr2:178611791;178611790;178611789 | chr2:179476518;179476517;179476516 |
N2AB | 15199 | 45820;45821;45822 | chr2:178611791;178611790;178611789 | chr2:179476518;179476517;179476516 |
N2A | 14272 | 43039;43040;43041 | chr2:178611791;178611790;178611789 | chr2:179476518;179476517;179476516 |
N2B | 7775 | 23548;23549;23550 | chr2:178611791;178611790;178611789 | chr2:179476518;179476517;179476516 |
Novex-1 | 7900 | 23923;23924;23925 | chr2:178611791;178611790;178611789 | chr2:179476518;179476517;179476516 |
Novex-2 | 7967 | 24124;24125;24126 | chr2:178611791;178611790;178611789 | chr2:179476518;179476517;179476516 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.539 | N | 0.709 | 0.255 | 0.226586394389 | gnomAD-4.0.0 | 6.84674E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99868E-07 | 0 | 0 |
P/L | None | None | 0.891 | N | 0.901 | 0.336 | 0.483891081108 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2417 | likely_benign | 0.2629 | benign | -1.187 | Destabilizing | 0.539 | D | 0.709 | prob.delet. | N | 0.471305467 | None | None | N |
P/C | 0.9456 | likely_pathogenic | 0.9489 | pathogenic | -0.776 | Destabilizing | 0.988 | D | 0.9 | deleterious | None | None | None | None | N |
P/D | 0.9582 | likely_pathogenic | 0.9504 | pathogenic | -0.789 | Destabilizing | 0.916 | D | 0.821 | deleterious | None | None | None | None | N |
P/E | 0.872 | likely_pathogenic | 0.8685 | pathogenic | -0.83 | Destabilizing | 0.844 | D | 0.82 | deleterious | None | None | None | None | N |
P/F | 0.9672 | likely_pathogenic | 0.9661 | pathogenic | -0.994 | Destabilizing | 0.988 | D | 0.91 | deleterious | None | None | None | None | N |
P/G | 0.8319 | likely_pathogenic | 0.8588 | pathogenic | -1.45 | Destabilizing | 0.607 | D | 0.796 | deleterious | None | None | None | None | N |
P/H | 0.8866 | likely_pathogenic | 0.8739 | pathogenic | -0.953 | Destabilizing | 0.984 | D | 0.851 | deleterious | D | 0.656543706 | None | None | N |
P/I | 0.8582 | likely_pathogenic | 0.8601 | pathogenic | -0.592 | Destabilizing | 0.916 | D | 0.906 | deleterious | None | None | None | None | N |
P/K | 0.9302 | likely_pathogenic | 0.9153 | pathogenic | -0.959 | Destabilizing | 0.844 | D | 0.807 | deleterious | None | None | None | None | N |
P/L | 0.6672 | likely_pathogenic | 0.6456 | pathogenic | -0.592 | Destabilizing | 0.891 | D | 0.901 | deleterious | N | 0.475992039 | None | None | N |
P/M | 0.8478 | likely_pathogenic | 0.8519 | pathogenic | -0.457 | Destabilizing | 0.996 | D | 0.858 | deleterious | None | None | None | None | N |
P/N | 0.9191 | likely_pathogenic | 0.9211 | pathogenic | -0.685 | Destabilizing | 0.844 | D | 0.882 | deleterious | None | None | None | None | N |
P/Q | 0.7943 | likely_pathogenic | 0.7913 | pathogenic | -0.89 | Destabilizing | 0.916 | D | 0.852 | deleterious | None | None | None | None | N |
P/R | 0.8861 | likely_pathogenic | 0.8534 | pathogenic | -0.418 | Destabilizing | 0.891 | D | 0.888 | deleterious | D | 0.655585495 | None | None | N |
P/S | 0.6477 | likely_pathogenic | 0.6641 | pathogenic | -1.177 | Destabilizing | 0.017 | N | 0.411 | neutral | N | 0.470099282 | None | None | N |
P/T | 0.5837 | likely_pathogenic | 0.5995 | pathogenic | -1.112 | Destabilizing | 0.804 | D | 0.786 | deleterious | N | 0.474944622 | None | None | N |
P/V | 0.724 | likely_pathogenic | 0.7324 | pathogenic | -0.754 | Destabilizing | 0.916 | D | 0.885 | deleterious | None | None | None | None | N |
P/W | 0.9906 | likely_pathogenic | 0.9893 | pathogenic | -1.121 | Destabilizing | 0.996 | D | 0.893 | deleterious | None | None | None | None | N |
P/Y | 0.9651 | likely_pathogenic | 0.9624 | pathogenic | -0.842 | Destabilizing | 0.988 | D | 0.91 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.