Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16853 | 50782;50783;50784 | chr2:178611672;178611671;178611670 | chr2:179476399;179476398;179476397 |
N2AB | 15212 | 45859;45860;45861 | chr2:178611672;178611671;178611670 | chr2:179476399;179476398;179476397 |
N2A | 14285 | 43078;43079;43080 | chr2:178611672;178611671;178611670 | chr2:179476399;179476398;179476397 |
N2B | 7788 | 23587;23588;23589 | chr2:178611672;178611671;178611670 | chr2:179476399;179476398;179476397 |
Novex-1 | 7913 | 23962;23963;23964 | chr2:178611672;178611671;178611670 | chr2:179476399;179476398;179476397 |
Novex-2 | 7980 | 24163;24164;24165 | chr2:178611672;178611671;178611670 | chr2:179476399;179476398;179476397 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs373517736 | None | 1.0 | D | 0.822 | 0.474 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9001 | likely_pathogenic | 0.9183 | pathogenic | -1.534 | Destabilizing | 0.999 | D | 0.841 | deleterious | D | 0.742889196 | None | None | N |
P/C | 0.9937 | likely_pathogenic | 0.9956 | pathogenic | -2.193 | Highly Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
P/D | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -3.375 | Highly Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
P/E | 0.9989 | likely_pathogenic | 0.9993 | pathogenic | -3.306 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
P/F | 0.9996 | likely_pathogenic | 0.9998 | pathogenic | -1.137 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
P/G | 0.995 | likely_pathogenic | 0.9964 | pathogenic | -1.847 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
P/H | 0.9986 | likely_pathogenic | 0.9992 | pathogenic | -1.266 | Destabilizing | 1.0 | D | 0.773 | deleterious | D | 0.779177797 | None | None | N |
P/I | 0.9939 | likely_pathogenic | 0.9956 | pathogenic | -0.723 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
P/K | 0.9993 | likely_pathogenic | 0.9996 | pathogenic | -1.586 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
P/L | 0.9785 | likely_pathogenic | 0.9838 | pathogenic | -0.723 | Destabilizing | 1.0 | D | 0.822 | deleterious | D | 0.776129411 | None | None | N |
P/M | 0.9979 | likely_pathogenic | 0.9985 | pathogenic | -1.049 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
P/N | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -1.957 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
P/Q | 0.9979 | likely_pathogenic | 0.9987 | pathogenic | -2.112 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
P/R | 0.9969 | likely_pathogenic | 0.9982 | pathogenic | -1.118 | Destabilizing | 1.0 | D | 0.83 | deleterious | D | 0.744182425 | None | None | N |
P/S | 0.9905 | likely_pathogenic | 0.9926 | pathogenic | -2.274 | Highly Destabilizing | 1.0 | D | 0.802 | deleterious | D | 0.675699215 | None | None | N |
P/T | 0.9896 | likely_pathogenic | 0.9925 | pathogenic | -2.103 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | D | 0.63866109 | None | None | N |
P/V | 0.9775 | likely_pathogenic | 0.9843 | pathogenic | -0.967 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
P/W | 0.9999 | likely_pathogenic | 1.0 | pathogenic | -1.466 | Destabilizing | 1.0 | D | 0.729 | deleterious | None | None | None | None | N |
P/Y | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -1.123 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.