Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16877 | 50854;50855;50856 | chr2:178611600;178611599;178611598 | chr2:179476327;179476326;179476325 |
N2AB | 15236 | 45931;45932;45933 | chr2:178611600;178611599;178611598 | chr2:179476327;179476326;179476325 |
N2A | 14309 | 43150;43151;43152 | chr2:178611600;178611599;178611598 | chr2:179476327;179476326;179476325 |
N2B | 7812 | 23659;23660;23661 | chr2:178611600;178611599;178611598 | chr2:179476327;179476326;179476325 |
Novex-1 | 7937 | 24034;24035;24036 | chr2:178611600;178611599;178611598 | chr2:179476327;179476326;179476325 |
Novex-2 | 8004 | 24235;24236;24237 | chr2:178611600;178611599;178611598 | chr2:179476327;179476326;179476325 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.801 | N | 0.43 | 0.239 | 0.44307954383 | gnomAD-4.0.0 | 1.5929E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86125E-06 | 0 | 0 |
E/Q | rs566364225 | 0.378 | 0.136 | N | 0.205 | 0.155 | 0.245101548738 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 9.81E-05 | None | 0 | 0 | 0 |
E/Q | rs566364225 | 0.378 | 0.136 | N | 0.205 | 0.155 | 0.245101548738 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06868E-04 | 0 |
E/Q | rs566364225 | 0.378 | 0.136 | N | 0.205 | 0.155 | 0.245101548738 | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
E/Q | rs566364225 | 0.378 | 0.136 | N | 0.205 | 0.155 | 0.245101548738 | gnomAD-4.0.0 | 5.12873E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.36193E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1811 | likely_benign | 0.1995 | benign | -0.142 | Destabilizing | 0.625 | D | 0.381 | neutral | N | 0.465346757 | None | None | I |
E/C | 0.9247 | likely_pathogenic | 0.9369 | pathogenic | -0.25 | Destabilizing | 0.998 | D | 0.292 | neutral | None | None | None | None | I |
E/D | 0.2039 | likely_benign | 0.2102 | benign | -0.304 | Destabilizing | 0.012 | N | 0.193 | neutral | N | 0.475010338 | None | None | I |
E/F | 0.8818 | likely_pathogenic | 0.9022 | pathogenic | -0.051 | Destabilizing | 0.949 | D | 0.359 | neutral | None | None | None | None | I |
E/G | 0.2251 | likely_benign | 0.2488 | benign | -0.289 | Destabilizing | 0.801 | D | 0.43 | neutral | N | 0.483280564 | None | None | I |
E/H | 0.6877 | likely_pathogenic | 0.6985 | pathogenic | 0.514 | Stabilizing | 0.974 | D | 0.355 | neutral | None | None | None | None | I |
E/I | 0.465 | ambiguous | 0.499 | ambiguous | 0.196 | Stabilizing | 0.728 | D | 0.433 | neutral | None | None | None | None | I |
E/K | 0.2285 | likely_benign | 0.2525 | benign | 0.377 | Stabilizing | 0.669 | D | 0.389 | neutral | N | 0.466053812 | None | None | I |
E/L | 0.4335 | ambiguous | 0.4841 | ambiguous | 0.196 | Stabilizing | 0.007 | N | 0.209 | neutral | None | None | None | None | I |
E/M | 0.5831 | likely_pathogenic | 0.6157 | pathogenic | -0.005 | Destabilizing | 0.949 | D | 0.337 | neutral | None | None | None | None | I |
E/N | 0.4138 | ambiguous | 0.455 | ambiguous | 0.022 | Stabilizing | 0.728 | D | 0.374 | neutral | None | None | None | None | I |
E/P | 0.6317 | likely_pathogenic | 0.7141 | pathogenic | 0.102 | Stabilizing | 0.974 | D | 0.371 | neutral | None | None | None | None | I |
E/Q | 0.1921 | likely_benign | 0.1876 | benign | 0.054 | Stabilizing | 0.136 | N | 0.205 | neutral | N | 0.472414888 | None | None | I |
E/R | 0.388 | ambiguous | 0.4053 | ambiguous | 0.66 | Stabilizing | 0.842 | D | 0.385 | neutral | None | None | None | None | I |
E/S | 0.2658 | likely_benign | 0.2934 | benign | -0.11 | Destabilizing | 0.842 | D | 0.351 | neutral | None | None | None | None | I |
E/T | 0.3362 | likely_benign | 0.3742 | ambiguous | 0.02 | Stabilizing | 0.842 | D | 0.428 | neutral | None | None | None | None | I |
E/V | 0.2709 | likely_benign | 0.2885 | benign | 0.102 | Stabilizing | 0.051 | N | 0.231 | neutral | N | 0.484559149 | None | None | I |
E/W | 0.9584 | likely_pathogenic | 0.9658 | pathogenic | 0.053 | Stabilizing | 0.998 | D | 0.321 | neutral | None | None | None | None | I |
E/Y | 0.822 | likely_pathogenic | 0.8422 | pathogenic | 0.183 | Stabilizing | 0.974 | D | 0.367 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.