Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1687750854;50855;50856 chr2:178611600;178611599;178611598chr2:179476327;179476326;179476325
N2AB1523645931;45932;45933 chr2:178611600;178611599;178611598chr2:179476327;179476326;179476325
N2A1430943150;43151;43152 chr2:178611600;178611599;178611598chr2:179476327;179476326;179476325
N2B781223659;23660;23661 chr2:178611600;178611599;178611598chr2:179476327;179476326;179476325
Novex-1793724034;24035;24036 chr2:178611600;178611599;178611598chr2:179476327;179476326;179476325
Novex-2800424235;24236;24237 chr2:178611600;178611599;178611598chr2:179476327;179476326;179476325
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAG
  • RefSeq wild type template codon: CTC
  • Domain: Fn3-11
  • Domain position: 26
  • Structural Position: 28
  • Q(SASA): 0.6735
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/G None None 0.801 N 0.43 0.239 0.44307954383 gnomAD-4.0.0 1.5929E-06 None None None None I None 0 0 None 0 0 None 0 0 2.86125E-06 0 0
E/Q rs566364225 0.378 0.136 N 0.205 0.155 0.245101548738 gnomAD-2.1.1 1.21E-05 None None None None I None 0 0 None 0 0 None 9.81E-05 None 0 0 0
E/Q rs566364225 0.378 0.136 N 0.205 0.155 0.245101548738 gnomAD-3.1.2 6.58E-06 None None None None I None 0 0 0 0 0 None 0 0 0 2.06868E-04 0
E/Q rs566364225 0.378 0.136 N 0.205 0.155 0.245101548738 1000 genomes 1.99681E-04 None None None None I None 0 0 None None 0 0 None None None 1E-03 None
E/Q rs566364225 0.378 0.136 N 0.205 0.155 0.245101548738 gnomAD-4.0.0 5.12873E-06 None None None None I None 0 0 None 0 0 None 0 0 0 5.36193E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.1811 likely_benign 0.1995 benign -0.142 Destabilizing 0.625 D 0.381 neutral N 0.465346757 None None I
E/C 0.9247 likely_pathogenic 0.9369 pathogenic -0.25 Destabilizing 0.998 D 0.292 neutral None None None None I
E/D 0.2039 likely_benign 0.2102 benign -0.304 Destabilizing 0.012 N 0.193 neutral N 0.475010338 None None I
E/F 0.8818 likely_pathogenic 0.9022 pathogenic -0.051 Destabilizing 0.949 D 0.359 neutral None None None None I
E/G 0.2251 likely_benign 0.2488 benign -0.289 Destabilizing 0.801 D 0.43 neutral N 0.483280564 None None I
E/H 0.6877 likely_pathogenic 0.6985 pathogenic 0.514 Stabilizing 0.974 D 0.355 neutral None None None None I
E/I 0.465 ambiguous 0.499 ambiguous 0.196 Stabilizing 0.728 D 0.433 neutral None None None None I
E/K 0.2285 likely_benign 0.2525 benign 0.377 Stabilizing 0.669 D 0.389 neutral N 0.466053812 None None I
E/L 0.4335 ambiguous 0.4841 ambiguous 0.196 Stabilizing 0.007 N 0.209 neutral None None None None I
E/M 0.5831 likely_pathogenic 0.6157 pathogenic -0.005 Destabilizing 0.949 D 0.337 neutral None None None None I
E/N 0.4138 ambiguous 0.455 ambiguous 0.022 Stabilizing 0.728 D 0.374 neutral None None None None I
E/P 0.6317 likely_pathogenic 0.7141 pathogenic 0.102 Stabilizing 0.974 D 0.371 neutral None None None None I
E/Q 0.1921 likely_benign 0.1876 benign 0.054 Stabilizing 0.136 N 0.205 neutral N 0.472414888 None None I
E/R 0.388 ambiguous 0.4053 ambiguous 0.66 Stabilizing 0.842 D 0.385 neutral None None None None I
E/S 0.2658 likely_benign 0.2934 benign -0.11 Destabilizing 0.842 D 0.351 neutral None None None None I
E/T 0.3362 likely_benign 0.3742 ambiguous 0.02 Stabilizing 0.842 D 0.428 neutral None None None None I
E/V 0.2709 likely_benign 0.2885 benign 0.102 Stabilizing 0.051 N 0.231 neutral N 0.484559149 None None I
E/W 0.9584 likely_pathogenic 0.9658 pathogenic 0.053 Stabilizing 0.998 D 0.321 neutral None None None None I
E/Y 0.822 likely_pathogenic 0.8422 pathogenic 0.183 Stabilizing 0.974 D 0.367 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.