Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16878 | 50857;50858;50859 | chr2:178611597;178611596;178611595 | chr2:179476324;179476323;179476322 |
N2AB | 15237 | 45934;45935;45936 | chr2:178611597;178611596;178611595 | chr2:179476324;179476323;179476322 |
N2A | 14310 | 43153;43154;43155 | chr2:178611597;178611596;178611595 | chr2:179476324;179476323;179476322 |
N2B | 7813 | 23662;23663;23664 | chr2:178611597;178611596;178611595 | chr2:179476324;179476323;179476322 |
Novex-1 | 7938 | 24037;24038;24039 | chr2:178611597;178611596;178611595 | chr2:179476324;179476323;179476322 |
Novex-2 | 8005 | 24238;24239;24240 | chr2:178611597;178611596;178611595 | chr2:179476324;179476323;179476322 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.989 | N | 0.436 | 0.269 | 0.345632371893 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5894 | likely_pathogenic | 0.6123 | pathogenic | -0.005 | Destabilizing | 0.996 | D | 0.482 | neutral | None | None | None | None | I |
K/C | 0.8299 | likely_pathogenic | 0.8326 | pathogenic | -0.124 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
K/D | 0.7683 | likely_pathogenic | 0.7691 | pathogenic | 0.011 | Stabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | I |
K/E | 0.3036 | likely_benign | 0.3258 | benign | 0.006 | Stabilizing | 0.989 | D | 0.436 | neutral | N | 0.457475616 | None | None | I |
K/F | 0.8657 | likely_pathogenic | 0.8676 | pathogenic | -0.265 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | I |
K/G | 0.7163 | likely_pathogenic | 0.7073 | pathogenic | -0.197 | Destabilizing | 0.999 | D | 0.517 | neutral | None | None | None | None | I |
K/H | 0.4353 | ambiguous | 0.4121 | ambiguous | -0.553 | Destabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | I |
K/I | 0.5095 | ambiguous | 0.5496 | ambiguous | 0.421 | Stabilizing | 0.999 | D | 0.697 | prob.neutral | N | 0.473570693 | None | None | I |
K/L | 0.5734 | likely_pathogenic | 0.5658 | pathogenic | 0.421 | Stabilizing | 0.999 | D | 0.517 | neutral | None | None | None | None | I |
K/M | 0.3714 | ambiguous | 0.3708 | ambiguous | 0.332 | Stabilizing | 1.0 | D | 0.587 | neutral | None | None | None | None | I |
K/N | 0.5333 | ambiguous | 0.5442 | ambiguous | 0.288 | Stabilizing | 0.998 | D | 0.559 | neutral | N | 0.429104035 | None | None | I |
K/P | 0.9807 | likely_pathogenic | 0.9795 | pathogenic | 0.307 | Stabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | I |
K/Q | 0.1882 | likely_benign | 0.1871 | benign | 0.062 | Stabilizing | 0.997 | D | 0.568 | neutral | N | 0.470027381 | None | None | I |
K/R | 0.1039 | likely_benign | 0.0975 | benign | -0.018 | Destabilizing | 0.217 | N | 0.174 | neutral | N | 0.445430326 | None | None | I |
K/S | 0.6092 | likely_pathogenic | 0.6293 | pathogenic | -0.199 | Destabilizing | 0.996 | D | 0.49 | neutral | None | None | None | None | I |
K/T | 0.3081 | likely_benign | 0.3355 | benign | -0.062 | Destabilizing | 0.998 | D | 0.543 | neutral | N | 0.459942895 | None | None | I |
K/V | 0.4685 | ambiguous | 0.4994 | ambiguous | 0.307 | Stabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | I |
K/W | 0.8886 | likely_pathogenic | 0.8718 | pathogenic | -0.263 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
K/Y | 0.7481 | likely_pathogenic | 0.7272 | pathogenic | 0.098 | Stabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.