Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16885 | 50878;50879;50880 | chr2:178611576;178611575;178611574 | chr2:179476303;179476302;179476301 |
N2AB | 15244 | 45955;45956;45957 | chr2:178611576;178611575;178611574 | chr2:179476303;179476302;179476301 |
N2A | 14317 | 43174;43175;43176 | chr2:178611576;178611575;178611574 | chr2:179476303;179476302;179476301 |
N2B | 7820 | 23683;23684;23685 | chr2:178611576;178611575;178611574 | chr2:179476303;179476302;179476301 |
Novex-1 | 7945 | 24058;24059;24060 | chr2:178611576;178611575;178611574 | chr2:179476303;179476302;179476301 |
Novex-2 | 8012 | 24259;24260;24261 | chr2:178611576;178611575;178611574 | chr2:179476303;179476302;179476301 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs2056332746 | None | 0.27 | N | 0.313 | 0.227 | 0.469248961376 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
I/V | rs1405647586 | -0.494 | 0.139 | N | 0.16 | 0.045 | 0.382761230579 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
I/V | rs1405647586 | -0.494 | 0.139 | N | 0.16 | 0.045 | 0.382761230579 | gnomAD-4.0.0 | 5.47609E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19819E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2553 | likely_benign | 0.2995 | benign | -1.11 | Destabilizing | 0.013 | N | 0.135 | neutral | None | None | None | None | I |
I/C | 0.7728 | likely_pathogenic | 0.7861 | pathogenic | -0.671 | Destabilizing | 0.981 | D | 0.291 | neutral | None | None | None | None | I |
I/D | 0.8408 | likely_pathogenic | 0.8859 | pathogenic | -0.663 | Destabilizing | 0.704 | D | 0.392 | neutral | None | None | None | None | I |
I/E | 0.6777 | likely_pathogenic | 0.7594 | pathogenic | -0.725 | Destabilizing | 0.704 | D | 0.357 | neutral | None | None | None | None | I |
I/F | 0.2549 | likely_benign | 0.2474 | benign | -0.892 | Destabilizing | 0.893 | D | 0.315 | neutral | None | None | None | None | I |
I/G | 0.6999 | likely_pathogenic | 0.7489 | pathogenic | -1.349 | Destabilizing | 0.003 | N | 0.205 | neutral | None | None | None | None | I |
I/H | 0.622 | likely_pathogenic | 0.6635 | pathogenic | -0.638 | Destabilizing | 0.981 | D | 0.274 | neutral | None | None | None | None | I |
I/K | 0.5138 | ambiguous | 0.5949 | pathogenic | -0.768 | Destabilizing | 0.473 | N | 0.345 | neutral | N | 0.463108553 | None | None | I |
I/L | 0.0979 | likely_benign | 0.1019 | benign | -0.571 | Destabilizing | 0.002 | N | 0.065 | neutral | N | 0.455996319 | None | None | I |
I/M | 0.1045 | likely_benign | 0.1104 | benign | -0.431 | Destabilizing | 0.863 | D | 0.303 | neutral | N | 0.478242839 | None | None | I |
I/N | 0.3976 | ambiguous | 0.4765 | ambiguous | -0.496 | Destabilizing | 0.704 | D | 0.392 | neutral | None | None | None | None | I |
I/P | 0.9334 | likely_pathogenic | 0.9245 | pathogenic | -0.717 | Destabilizing | 0.944 | D | 0.382 | neutral | None | None | None | None | I |
I/Q | 0.4929 | ambiguous | 0.5749 | pathogenic | -0.73 | Destabilizing | 0.893 | D | 0.369 | neutral | None | None | None | None | I |
I/R | 0.428 | ambiguous | 0.4911 | ambiguous | -0.15 | Destabilizing | 0.006 | N | 0.222 | neutral | N | 0.479142757 | None | None | I |
I/S | 0.2823 | likely_benign | 0.3337 | benign | -0.989 | Destabilizing | 0.085 | N | 0.209 | neutral | None | None | None | None | I |
I/T | 0.1085 | likely_benign | 0.116 | benign | -0.942 | Destabilizing | 0.27 | N | 0.313 | neutral | N | 0.407226416 | None | None | I |
I/V | 0.0888 | likely_benign | 0.0924 | benign | -0.717 | Destabilizing | 0.139 | N | 0.16 | neutral | N | 0.473559509 | None | None | I |
I/W | 0.8354 | likely_pathogenic | 0.8283 | pathogenic | -0.926 | Destabilizing | 0.995 | D | 0.297 | neutral | None | None | None | None | I |
I/Y | 0.6696 | likely_pathogenic | 0.6785 | pathogenic | -0.707 | Destabilizing | 0.981 | D | 0.344 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.