Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16894 | 50905;50906;50907 | chr2:178611549;178611548;178611547 | chr2:179476276;179476275;179476274 |
N2AB | 15253 | 45982;45983;45984 | chr2:178611549;178611548;178611547 | chr2:179476276;179476275;179476274 |
N2A | 14326 | 43201;43202;43203 | chr2:178611549;178611548;178611547 | chr2:179476276;179476275;179476274 |
N2B | 7829 | 23710;23711;23712 | chr2:178611549;178611548;178611547 | chr2:179476276;179476275;179476274 |
Novex-1 | 7954 | 24085;24086;24087 | chr2:178611549;178611548;178611547 | chr2:179476276;179476275;179476274 |
Novex-2 | 8021 | 24286;24287;24288 | chr2:178611549;178611548;178611547 | chr2:179476276;179476275;179476274 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1270525854 | -0.957 | 0.001 | N | 0.159 | 0.116 | 0.243972157842 | gnomAD-2.1.1 | 7.17E-06 | None | None | None | None | N | None | 4.14E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 7.87E-06 | 0 |
V/A | rs1270525854 | -0.957 | 0.001 | N | 0.159 | 0.116 | 0.243972157842 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/A | rs1270525854 | -0.957 | 0.001 | N | 0.159 | 0.116 | 0.243972157842 | gnomAD-4.0.0 | 4.33989E-06 | None | None | None | None | N | None | 1.33561E-05 | 0 | None | 0 | 2.23584E-05 | None | 0 | 0 | 4.23967E-06 | 0 | 0 |
V/I | rs754878640 | -0.452 | 0.517 | N | 0.404 | 0.162 | 0.290590437066 | gnomAD-2.1.1 | 7.17E-06 | None | None | None | None | N | None | 0 | 2.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 7.87E-06 | 0 |
V/I | rs754878640 | -0.452 | 0.517 | N | 0.404 | 0.162 | 0.290590437066 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/I | rs754878640 | -0.452 | 0.517 | N | 0.404 | 0.162 | 0.290590437066 | gnomAD-4.0.0 | 1.23998E-06 | None | None | None | None | N | None | 0 | 1.66839E-05 | None | 0 | 0 | None | 0 | 0 | 8.47939E-07 | 0 | 0 |
V/L | rs754878640 | -0.408 | 0.349 | N | 0.396 | 0.165 | 0.207176502487 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
V/L | rs754878640 | -0.408 | 0.349 | N | 0.396 | 0.165 | 0.207176502487 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/L | rs754878640 | -0.408 | 0.349 | N | 0.396 | 0.165 | 0.207176502487 | gnomAD-4.0.0 | 4.33992E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08763E-06 | 0 | 1.60226E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1073 | likely_benign | 0.1044 | benign | -1.187 | Destabilizing | 0.001 | N | 0.159 | neutral | N | 0.392961708 | None | None | N |
V/C | 0.8078 | likely_pathogenic | 0.8129 | pathogenic | -0.72 | Destabilizing | 0.989 | D | 0.523 | neutral | None | None | None | None | N |
V/D | 0.5263 | ambiguous | 0.4511 | ambiguous | -1.044 | Destabilizing | 0.961 | D | 0.659 | neutral | None | None | None | None | N |
V/E | 0.3461 | ambiguous | 0.3091 | benign | -1.117 | Destabilizing | 0.901 | D | 0.577 | neutral | N | 0.441240522 | None | None | N |
V/F | 0.2941 | likely_benign | 0.2623 | benign | -1.136 | Destabilizing | 0.961 | D | 0.524 | neutral | None | None | None | None | N |
V/G | 0.2771 | likely_benign | 0.2415 | benign | -1.416 | Destabilizing | 0.565 | D | 0.549 | neutral | N | 0.433492316 | None | None | N |
V/H | 0.6947 | likely_pathogenic | 0.6631 | pathogenic | -0.972 | Destabilizing | 0.996 | D | 0.66 | neutral | None | None | None | None | N |
V/I | 0.089 | likely_benign | 0.0909 | benign | -0.693 | Destabilizing | 0.517 | D | 0.404 | neutral | N | 0.45872428 | None | None | N |
V/K | 0.3526 | ambiguous | 0.3138 | benign | -1.026 | Destabilizing | 0.923 | D | 0.586 | neutral | None | None | None | None | N |
V/L | 0.2416 | likely_benign | 0.2418 | benign | -0.693 | Destabilizing | 0.349 | N | 0.396 | neutral | N | 0.457337303 | None | None | N |
V/M | 0.1676 | likely_benign | 0.1664 | benign | -0.443 | Destabilizing | 0.987 | D | 0.485 | neutral | None | None | None | None | N |
V/N | 0.3452 | ambiguous | 0.3151 | benign | -0.714 | Destabilizing | 0.961 | D | 0.664 | neutral | None | None | None | None | N |
V/P | 0.6245 | likely_pathogenic | 0.5385 | ambiguous | -0.823 | Destabilizing | 0.961 | D | 0.635 | neutral | None | None | None | None | N |
V/Q | 0.3614 | ambiguous | 0.3464 | ambiguous | -0.975 | Destabilizing | 0.961 | D | 0.649 | neutral | None | None | None | None | N |
V/R | 0.357 | ambiguous | 0.3164 | benign | -0.409 | Destabilizing | 0.923 | D | 0.663 | neutral | None | None | None | None | N |
V/S | 0.191 | likely_benign | 0.1823 | benign | -1.123 | Destabilizing | 0.633 | D | 0.553 | neutral | None | None | None | None | N |
V/T | 0.1624 | likely_benign | 0.1594 | benign | -1.099 | Destabilizing | 0.775 | D | 0.386 | neutral | None | None | None | None | N |
V/W | 0.9282 | likely_pathogenic | 0.9122 | pathogenic | -1.254 | Destabilizing | 0.996 | D | 0.698 | prob.neutral | None | None | None | None | N |
V/Y | 0.7368 | likely_pathogenic | 0.7045 | pathogenic | -0.987 | Destabilizing | 0.987 | D | 0.514 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.