Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16896 | 50911;50912;50913 | chr2:178611543;178611542;178611541 | chr2:179476270;179476269;179476268 |
N2AB | 15255 | 45988;45989;45990 | chr2:178611543;178611542;178611541 | chr2:179476270;179476269;179476268 |
N2A | 14328 | 43207;43208;43209 | chr2:178611543;178611542;178611541 | chr2:179476270;179476269;179476268 |
N2B | 7831 | 23716;23717;23718 | chr2:178611543;178611542;178611541 | chr2:179476270;179476269;179476268 |
Novex-1 | 7956 | 24091;24092;24093 | chr2:178611543;178611542;178611541 | chr2:179476270;179476269;179476268 |
Novex-2 | 8023 | 24292;24293;24294 | chr2:178611543;178611542;178611541 | chr2:179476270;179476269;179476268 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.999 | N | 0.381 | 0.215 | 0.173771789658 | gnomAD-4.0.0 | 2.05348E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69933E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1717 | likely_benign | 0.1402 | benign | -0.317 | Destabilizing | 0.999 | D | 0.381 | neutral | N | 0.472627518 | None | None | I |
T/C | 0.6848 | likely_pathogenic | 0.6473 | pathogenic | -0.172 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
T/D | 0.6222 | likely_pathogenic | 0.4963 | ambiguous | 0.036 | Stabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | I |
T/E | 0.5236 | ambiguous | 0.3967 | ambiguous | -0.032 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | I |
T/F | 0.6636 | likely_pathogenic | 0.5638 | ambiguous | -0.709 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
T/G | 0.353 | ambiguous | 0.3146 | benign | -0.472 | Destabilizing | 1.0 | D | 0.599 | neutral | None | None | None | None | I |
T/H | 0.5609 | ambiguous | 0.4663 | ambiguous | -0.76 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
T/I | 0.6259 | likely_pathogenic | 0.5042 | ambiguous | -0.022 | Destabilizing | 1.0 | D | 0.611 | neutral | D | 0.53227434 | None | None | I |
T/K | 0.4803 | ambiguous | 0.3419 | ambiguous | -0.469 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | I |
T/L | 0.2726 | likely_benign | 0.2218 | benign | -0.022 | Destabilizing | 0.999 | D | 0.503 | neutral | None | None | None | None | I |
T/M | 0.1896 | likely_benign | 0.1492 | benign | 0.117 | Stabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
T/N | 0.2254 | likely_benign | 0.1789 | benign | -0.18 | Destabilizing | 1.0 | D | 0.649 | neutral | N | 0.46827322 | None | None | I |
T/P | 0.5179 | ambiguous | 0.3888 | ambiguous | -0.091 | Destabilizing | 1.0 | D | 0.627 | neutral | N | 0.474783964 | None | None | I |
T/Q | 0.4171 | ambiguous | 0.3206 | benign | -0.398 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
T/R | 0.4586 | ambiguous | 0.3152 | benign | -0.182 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | I |
T/S | 0.143 | likely_benign | 0.1323 | benign | -0.371 | Destabilizing | 0.999 | D | 0.387 | neutral | N | 0.442543252 | None | None | I |
T/V | 0.4195 | ambiguous | 0.3548 | ambiguous | -0.091 | Destabilizing | 0.999 | D | 0.458 | neutral | None | None | None | None | I |
T/W | 0.8812 | likely_pathogenic | 0.8304 | pathogenic | -0.736 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
T/Y | 0.7222 | likely_pathogenic | 0.6221 | pathogenic | -0.466 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.