Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16913 | 50962;50963;50964 | chr2:178611492;178611491;178611490 | chr2:179476219;179476218;179476217 |
N2AB | 15272 | 46039;46040;46041 | chr2:178611492;178611491;178611490 | chr2:179476219;179476218;179476217 |
N2A | 14345 | 43258;43259;43260 | chr2:178611492;178611491;178611490 | chr2:179476219;179476218;179476217 |
N2B | 7848 | 23767;23768;23769 | chr2:178611492;178611491;178611490 | chr2:179476219;179476218;179476217 |
Novex-1 | 7973 | 24142;24143;24144 | chr2:178611492;178611491;178611490 | chr2:179476219;179476218;179476217 |
Novex-2 | 8040 | 24343;24344;24345 | chr2:178611492;178611491;178611490 | chr2:179476219;179476218;179476217 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs559219228 | -0.926 | 0.98 | N | 0.506 | 0.221 | 0.221734844693 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/N | rs559219228 | -0.926 | 0.98 | N | 0.506 | 0.221 | 0.221734844693 | gnomAD-4.0.0 | 1.59292E-06 | None | None | None | None | N | None | 0 | 2.28833E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/Q | None | None | 0.489 | N | 0.404 | 0.156 | 0.246215685461 | gnomAD-4.0.0 | 1.59296E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86144E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4475 | ambiguous | 0.5953 | pathogenic | -0.559 | Destabilizing | 0.97 | D | 0.567 | neutral | None | None | None | None | N |
K/C | 0.6677 | likely_pathogenic | 0.8165 | pathogenic | -0.556 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
K/D | 0.7489 | likely_pathogenic | 0.8651 | pathogenic | -0.235 | Destabilizing | 0.97 | D | 0.581 | neutral | None | None | None | None | N |
K/E | 0.3103 | likely_benign | 0.4403 | ambiguous | -0.108 | Destabilizing | 0.835 | D | 0.526 | neutral | N | 0.463313483 | None | None | N |
K/F | 0.8213 | likely_pathogenic | 0.9011 | pathogenic | -0.131 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/G | 0.6849 | likely_pathogenic | 0.828 | pathogenic | -0.936 | Destabilizing | 0.985 | D | 0.613 | neutral | None | None | None | None | N |
K/H | 0.3314 | likely_benign | 0.423 | ambiguous | -1.187 | Destabilizing | 0.996 | D | 0.655 | neutral | None | None | None | None | N |
K/I | 0.3348 | likely_benign | 0.4421 | ambiguous | 0.423 | Stabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
K/L | 0.3698 | ambiguous | 0.4925 | ambiguous | 0.423 | Stabilizing | 0.97 | D | 0.613 | neutral | None | None | None | None | N |
K/M | 0.2647 | likely_benign | 0.3534 | ambiguous | 0.151 | Stabilizing | 0.998 | D | 0.655 | neutral | N | 0.481849883 | None | None | N |
K/N | 0.5592 | ambiguous | 0.6926 | pathogenic | -0.596 | Destabilizing | 0.98 | D | 0.506 | neutral | N | 0.4729407 | None | None | N |
K/P | 0.7897 | likely_pathogenic | 0.8778 | pathogenic | 0.126 | Stabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
K/Q | 0.1744 | likely_benign | 0.2156 | benign | -0.578 | Destabilizing | 0.489 | N | 0.404 | neutral | N | 0.477085407 | None | None | N |
K/R | 0.0816 | likely_benign | 0.0927 | benign | -0.686 | Destabilizing | 0.031 | N | 0.18 | neutral | N | 0.412535183 | None | None | N |
K/S | 0.5376 | ambiguous | 0.6775 | pathogenic | -1.166 | Destabilizing | 0.97 | D | 0.51 | neutral | None | None | None | None | N |
K/T | 0.1881 | likely_benign | 0.2566 | benign | -0.831 | Destabilizing | 0.98 | D | 0.565 | neutral | N | 0.418320239 | None | None | N |
K/V | 0.2971 | likely_benign | 0.411 | ambiguous | 0.126 | Stabilizing | 0.996 | D | 0.673 | neutral | None | None | None | None | N |
K/W | 0.7943 | likely_pathogenic | 0.8788 | pathogenic | -0.06 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
K/Y | 0.6925 | likely_pathogenic | 0.8205 | pathogenic | 0.203 | Stabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.