Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16915 | 50968;50969;50970 | chr2:178611486;178611485;178611484 | chr2:179476213;179476212;179476211 |
N2AB | 15274 | 46045;46046;46047 | chr2:178611486;178611485;178611484 | chr2:179476213;179476212;179476211 |
N2A | 14347 | 43264;43265;43266 | chr2:178611486;178611485;178611484 | chr2:179476213;179476212;179476211 |
N2B | 7850 | 23773;23774;23775 | chr2:178611486;178611485;178611484 | chr2:179476213;179476212;179476211 |
Novex-1 | 7975 | 24148;24149;24150 | chr2:178611486;178611485;178611484 | chr2:179476213;179476212;179476211 |
Novex-2 | 8042 | 24349;24350;24351 | chr2:178611486;178611485;178611484 | chr2:179476213;179476212;179476211 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.939 | N | 0.481 | 0.33 | 0.263140351381 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2639 | likely_benign | 0.3041 | benign | -0.67 | Destabilizing | 0.939 | D | 0.622 | neutral | N | 0.474043486 | None | None | N |
E/C | 0.8922 | likely_pathogenic | 0.9453 | pathogenic | -0.487 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
E/D | 0.1413 | likely_benign | 0.1778 | benign | -0.662 | Destabilizing | 0.02 | N | 0.171 | neutral | N | 0.396748022 | None | None | N |
E/F | 0.8684 | likely_pathogenic | 0.9317 | pathogenic | -0.177 | Destabilizing | 0.999 | D | 0.77 | deleterious | None | None | None | None | N |
E/G | 0.2434 | likely_benign | 0.2948 | benign | -0.961 | Destabilizing | 0.939 | D | 0.651 | neutral | N | 0.469321948 | None | None | N |
E/H | 0.7106 | likely_pathogenic | 0.8026 | pathogenic | -0.169 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
E/I | 0.5841 | likely_pathogenic | 0.7005 | pathogenic | 0.1 | Stabilizing | 0.993 | D | 0.798 | deleterious | None | None | None | None | N |
E/K | 0.3661 | ambiguous | 0.401 | ambiguous | -0.455 | Destabilizing | 0.939 | D | 0.481 | neutral | N | 0.452181185 | None | None | N |
E/L | 0.5657 | likely_pathogenic | 0.6777 | pathogenic | 0.1 | Stabilizing | 0.993 | D | 0.788 | deleterious | None | None | None | None | N |
E/M | 0.6347 | likely_pathogenic | 0.7209 | pathogenic | 0.236 | Stabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
E/N | 0.385 | ambiguous | 0.4885 | ambiguous | -0.788 | Destabilizing | 0.973 | D | 0.611 | neutral | None | None | None | None | N |
E/P | 0.7098 | likely_pathogenic | 0.8229 | pathogenic | -0.136 | Destabilizing | 0.993 | D | 0.793 | deleterious | None | None | None | None | N |
E/Q | 0.2695 | likely_benign | 0.3067 | benign | -0.692 | Destabilizing | 0.991 | D | 0.586 | neutral | N | 0.450475494 | None | None | N |
E/R | 0.5146 | ambiguous | 0.5844 | pathogenic | -0.071 | Destabilizing | 0.993 | D | 0.65 | neutral | None | None | None | None | N |
E/S | 0.2986 | likely_benign | 0.3574 | ambiguous | -1.045 | Destabilizing | 0.953 | D | 0.495 | neutral | None | None | None | None | N |
E/T | 0.3394 | likely_benign | 0.4075 | ambiguous | -0.814 | Destabilizing | 0.993 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/V | 0.3619 | ambiguous | 0.4429 | ambiguous | -0.136 | Destabilizing | 0.991 | D | 0.773 | deleterious | N | 0.390726171 | None | None | N |
E/W | 0.948 | likely_pathogenic | 0.9757 | pathogenic | 0.056 | Stabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | N |
E/Y | 0.8085 | likely_pathogenic | 0.893 | pathogenic | 0.048 | Stabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.