Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16923 | 50992;50993;50994 | chr2:178611462;178611461;178611460 | chr2:179476189;179476188;179476187 |
N2AB | 15282 | 46069;46070;46071 | chr2:178611462;178611461;178611460 | chr2:179476189;179476188;179476187 |
N2A | 14355 | 43288;43289;43290 | chr2:178611462;178611461;178611460 | chr2:179476189;179476188;179476187 |
N2B | 7858 | 23797;23798;23799 | chr2:178611462;178611461;178611460 | chr2:179476189;179476188;179476187 |
Novex-1 | 7983 | 24172;24173;24174 | chr2:178611462;178611461;178611460 | chr2:179476189;179476188;179476187 |
Novex-2 | 8050 | 24373;24374;24375 | chr2:178611462;178611461;178611460 | chr2:179476189;179476188;179476187 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.999 | N | 0.696 | 0.49 | 0.424073947737 | gnomAD-4.0.0 | 1.593E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8613E-06 | 0 | 0 |
E/K | None | None | 0.999 | N | 0.612 | 0.291 | 0.32082282376 | gnomAD-4.0.0 | 6.84537E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99774E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1686 | likely_benign | 0.2043 | benign | -0.741 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | N | 0.480601464 | None | None | N |
E/C | 0.8929 | likely_pathogenic | 0.9445 | pathogenic | -0.384 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
E/D | 0.3414 | ambiguous | 0.3349 | benign | -1.036 | Destabilizing | 0.999 | D | 0.488 | neutral | N | 0.478813222 | None | None | N |
E/F | 0.9126 | likely_pathogenic | 0.9393 | pathogenic | 0.042 | Stabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
E/G | 0.2731 | likely_benign | 0.3201 | benign | -1.153 | Destabilizing | 1.0 | D | 0.75 | deleterious | D | 0.535302845 | None | None | N |
E/H | 0.7324 | likely_pathogenic | 0.779 | pathogenic | -0.2 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
E/I | 0.5573 | ambiguous | 0.6266 | pathogenic | 0.397 | Stabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
E/K | 0.3118 | likely_benign | 0.3372 | benign | -0.504 | Destabilizing | 0.999 | D | 0.612 | neutral | N | 0.462781177 | None | None | N |
E/L | 0.6353 | likely_pathogenic | 0.6905 | pathogenic | 0.397 | Stabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
E/M | 0.5948 | likely_pathogenic | 0.6687 | pathogenic | 0.809 | Stabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
E/N | 0.4439 | ambiguous | 0.485 | ambiguous | -1.114 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
E/P | 0.4836 | ambiguous | 0.609 | pathogenic | 0.039 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
E/Q | 0.1842 | likely_benign | 0.2197 | benign | -0.923 | Destabilizing | 1.0 | D | 0.643 | neutral | N | 0.484201495 | None | None | N |
E/R | 0.4911 | ambiguous | 0.5586 | ambiguous | -0.215 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
E/S | 0.3016 | likely_benign | 0.3577 | ambiguous | -1.468 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
E/T | 0.3202 | likely_benign | 0.3656 | ambiguous | -1.113 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
E/V | 0.3436 | ambiguous | 0.3825 | ambiguous | 0.039 | Stabilizing | 1.0 | D | 0.798 | deleterious | N | 0.478232042 | None | None | N |
E/W | 0.9707 | likely_pathogenic | 0.9814 | pathogenic | 0.322 | Stabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
E/Y | 0.8423 | likely_pathogenic | 0.8822 | pathogenic | 0.323 | Stabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.