Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16933 | 51022;51023;51024 | chr2:178611432;178611431;178611430 | chr2:179476159;179476158;179476157 |
N2AB | 15292 | 46099;46100;46101 | chr2:178611432;178611431;178611430 | chr2:179476159;179476158;179476157 |
N2A | 14365 | 43318;43319;43320 | chr2:178611432;178611431;178611430 | chr2:179476159;179476158;179476157 |
N2B | 7868 | 23827;23828;23829 | chr2:178611432;178611431;178611430 | chr2:179476159;179476158;179476157 |
Novex-1 | 7993 | 24202;24203;24204 | chr2:178611432;178611431;178611430 | chr2:179476159;179476158;179476157 |
Novex-2 | 8060 | 24403;24404;24405 | chr2:178611432;178611431;178611430 | chr2:179476159;179476158;179476157 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs794729452 | -0.402 | 0.925 | N | 0.377 | 0.19 | None | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 1.14732E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/T | rs794729452 | -0.402 | 0.925 | N | 0.377 | 0.19 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | I | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/T | rs794729452 | -0.402 | 0.925 | N | 0.377 | 0.19 | None | gnomAD-4.0.0 | 9.92066E-06 | None | None | None | None | I | None | 6.67878E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 9.32754E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4922 | ambiguous | 0.6558 | pathogenic | -0.866 | Destabilizing | 1.0 | D | 0.357 | neutral | None | None | None | None | I |
A/D | 0.4601 | ambiguous | 0.5499 | ambiguous | -0.416 | Destabilizing | 0.989 | D | 0.521 | neutral | N | 0.445703351 | None | None | I |
A/E | 0.4034 | ambiguous | 0.4978 | ambiguous | -0.559 | Destabilizing | 0.97 | D | 0.433 | neutral | None | None | None | None | I |
A/F | 0.5061 | ambiguous | 0.6585 | pathogenic | -0.814 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | I |
A/G | 0.1417 | likely_benign | 0.1822 | benign | -0.327 | Destabilizing | 0.91 | D | 0.381 | neutral | N | 0.469898004 | None | None | I |
A/H | 0.5486 | ambiguous | 0.6452 | pathogenic | -0.272 | Destabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | I |
A/I | 0.2914 | likely_benign | 0.435 | ambiguous | -0.331 | Destabilizing | 0.996 | D | 0.457 | neutral | None | None | None | None | I |
A/K | 0.5916 | likely_pathogenic | 0.7013 | pathogenic | -0.667 | Destabilizing | 0.304 | N | 0.339 | neutral | None | None | None | None | I |
A/L | 0.2343 | likely_benign | 0.3247 | benign | -0.331 | Destabilizing | 0.985 | D | 0.433 | neutral | None | None | None | None | I |
A/M | 0.2849 | likely_benign | 0.3936 | ambiguous | -0.479 | Destabilizing | 1.0 | D | 0.454 | neutral | None | None | None | None | I |
A/N | 0.2678 | likely_benign | 0.3353 | benign | -0.406 | Destabilizing | 0.991 | D | 0.515 | neutral | None | None | None | None | I |
A/P | 0.3489 | ambiguous | 0.4012 | ambiguous | -0.28 | Destabilizing | 0.994 | D | 0.443 | neutral | N | 0.48155311 | None | None | I |
A/Q | 0.4014 | ambiguous | 0.4724 | ambiguous | -0.656 | Destabilizing | 0.991 | D | 0.459 | neutral | None | None | None | None | I |
A/R | 0.566 | likely_pathogenic | 0.6516 | pathogenic | -0.2 | Destabilizing | 0.983 | D | 0.403 | neutral | None | None | None | None | I |
A/S | 0.098 | likely_benign | 0.0981 | benign | -0.625 | Destabilizing | 0.287 | N | 0.126 | neutral | N | 0.416670317 | None | None | I |
A/T | 0.0964 | likely_benign | 0.1155 | benign | -0.683 | Destabilizing | 0.925 | D | 0.377 | neutral | N | 0.477707631 | None | None | I |
A/V | 0.1532 | likely_benign | 0.2228 | benign | -0.28 | Destabilizing | 0.98 | D | 0.373 | neutral | N | 0.482403351 | None | None | I |
A/W | 0.8657 | likely_pathogenic | 0.9328 | pathogenic | -0.951 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
A/Y | 0.6116 | likely_pathogenic | 0.756 | pathogenic | -0.615 | Destabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.