Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16965 | 51118;51119;51120 | chr2:178611236;178611235;178611234 | chr2:179475963;179475962;179475961 |
N2AB | 15324 | 46195;46196;46197 | chr2:178611236;178611235;178611234 | chr2:179475963;179475962;179475961 |
N2A | 14397 | 43414;43415;43416 | chr2:178611236;178611235;178611234 | chr2:179475963;179475962;179475961 |
N2B | 7900 | 23923;23924;23925 | chr2:178611236;178611235;178611234 | chr2:179475963;179475962;179475961 |
Novex-1 | 8025 | 24298;24299;24300 | chr2:178611236;178611235;178611234 | chr2:179475963;179475962;179475961 |
Novex-2 | 8092 | 24499;24500;24501 | chr2:178611236;178611235;178611234 | chr2:179475963;179475962;179475961 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.317 | N | 0.369 | 0.045 | 0.510172456258 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2616 | likely_benign | 0.2292 | benign | -1.161 | Destabilizing | 0.035 | N | 0.338 | neutral | None | None | None | None | I |
I/C | 0.7142 | likely_pathogenic | 0.6639 | pathogenic | -0.776 | Destabilizing | 0.824 | D | 0.381 | neutral | None | None | None | None | I |
I/D | 0.6961 | likely_pathogenic | 0.644 | pathogenic | -0.647 | Destabilizing | 0.555 | D | 0.402 | neutral | None | None | None | None | I |
I/E | 0.525 | ambiguous | 0.4795 | ambiguous | -0.67 | Destabilizing | 0.555 | D | 0.395 | neutral | None | None | None | None | I |
I/F | 0.2366 | likely_benign | 0.2051 | benign | -0.781 | Destabilizing | 0.317 | N | 0.317 | neutral | N | 0.510483256 | None | None | I |
I/G | 0.7198 | likely_pathogenic | 0.6622 | pathogenic | -1.428 | Destabilizing | 0.262 | N | 0.391 | neutral | None | None | None | None | I |
I/H | 0.564 | ambiguous | 0.4842 | ambiguous | -0.55 | Destabilizing | 0.935 | D | 0.369 | neutral | None | None | None | None | I |
I/K | 0.4612 | ambiguous | 0.4111 | ambiguous | -0.837 | Destabilizing | 0.555 | D | 0.395 | neutral | None | None | None | None | I |
I/L | 0.1487 | likely_benign | 0.1284 | benign | -0.526 | Destabilizing | 0.005 | N | 0.22 | neutral | N | 0.464965916 | None | None | I |
I/M | 0.1303 | likely_benign | 0.1094 | benign | -0.53 | Destabilizing | 0.317 | N | 0.369 | neutral | N | 0.490068566 | None | None | I |
I/N | 0.3172 | likely_benign | 0.2796 | benign | -0.669 | Destabilizing | 0.741 | D | 0.399 | neutral | N | 0.474219744 | None | None | I |
I/P | 0.8117 | likely_pathogenic | 0.7624 | pathogenic | -0.705 | Destabilizing | 0.555 | D | 0.408 | neutral | None | None | None | None | I |
I/Q | 0.4895 | ambiguous | 0.4331 | ambiguous | -0.838 | Destabilizing | 0.791 | D | 0.392 | neutral | None | None | None | None | I |
I/R | 0.3815 | ambiguous | 0.3333 | benign | -0.241 | Destabilizing | 0.555 | D | 0.394 | neutral | None | None | None | None | I |
I/S | 0.2774 | likely_benign | 0.2457 | benign | -1.198 | Destabilizing | 0.117 | N | 0.369 | neutral | N | 0.445296968 | None | None | I |
I/T | 0.1158 | likely_benign | 0.1021 | benign | -1.105 | Destabilizing | 0.062 | N | 0.311 | neutral | N | 0.397851736 | None | None | I |
I/V | 0.0635 | likely_benign | 0.0625 | benign | -0.705 | Destabilizing | None | N | 0.098 | neutral | N | 0.345602821 | None | None | I |
I/W | 0.8558 | likely_pathogenic | 0.8176 | pathogenic | -0.827 | Destabilizing | 0.935 | D | 0.454 | neutral | None | None | None | None | I |
I/Y | 0.5801 | likely_pathogenic | 0.5394 | ambiguous | -0.609 | Destabilizing | 0.555 | D | 0.401 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.