Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16966 | 51121;51122;51123 | chr2:178611233;178611232;178611231 | chr2:179475960;179475959;179475958 |
N2AB | 15325 | 46198;46199;46200 | chr2:178611233;178611232;178611231 | chr2:179475960;179475959;179475958 |
N2A | 14398 | 43417;43418;43419 | chr2:178611233;178611232;178611231 | chr2:179475960;179475959;179475958 |
N2B | 7901 | 23926;23927;23928 | chr2:178611233;178611232;178611231 | chr2:179475960;179475959;179475958 |
Novex-1 | 8026 | 24301;24302;24303 | chr2:178611233;178611232;178611231 | chr2:179475960;179475959;179475958 |
Novex-2 | 8093 | 24502;24503;24504 | chr2:178611233;178611232;178611231 | chr2:179475960;179475959;179475958 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 1.0 | D | 0.721 | 0.796 | 0.899195765859 | gnomAD-4.0.0 | 1.59394E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43377E-05 | 0 |
V/I | None | None | 0.997 | N | 0.481 | 0.402 | 0.798506520085 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4653 | ambiguous | 0.482 | ambiguous | -1.69 | Destabilizing | 0.999 | D | 0.463 | neutral | N | 0.514133588 | None | None | I |
V/C | 0.8644 | likely_pathogenic | 0.8538 | pathogenic | -1.333 | Destabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | I |
V/D | 0.9557 | likely_pathogenic | 0.9628 | pathogenic | -1.623 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | D | 0.749971047 | None | None | I |
V/E | 0.9015 | likely_pathogenic | 0.9114 | pathogenic | -1.518 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
V/F | 0.5475 | ambiguous | 0.5935 | pathogenic | -1.07 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | D | 0.640951556 | None | None | I |
V/G | 0.6785 | likely_pathogenic | 0.6985 | pathogenic | -2.11 | Highly Destabilizing | 1.0 | D | 0.721 | prob.delet. | D | 0.650841267 | None | None | I |
V/H | 0.9477 | likely_pathogenic | 0.9529 | pathogenic | -1.699 | Destabilizing | 1.0 | D | 0.648 | neutral | None | None | None | None | I |
V/I | 0.0977 | likely_benign | 0.1002 | benign | -0.587 | Destabilizing | 0.997 | D | 0.481 | neutral | N | 0.516673248 | None | None | I |
V/K | 0.8825 | likely_pathogenic | 0.8967 | pathogenic | -1.355 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
V/L | 0.3991 | ambiguous | 0.435 | ambiguous | -0.587 | Destabilizing | 0.997 | D | 0.49 | neutral | D | 0.523186421 | None | None | I |
V/M | 0.3895 | ambiguous | 0.4302 | ambiguous | -0.65 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
V/N | 0.876 | likely_pathogenic | 0.8956 | pathogenic | -1.372 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | I |
V/P | 0.9786 | likely_pathogenic | 0.9768 | pathogenic | -0.922 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
V/Q | 0.8524 | likely_pathogenic | 0.8674 | pathogenic | -1.389 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
V/R | 0.8492 | likely_pathogenic | 0.8584 | pathogenic | -1.036 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
V/S | 0.7121 | likely_pathogenic | 0.7362 | pathogenic | -2.005 | Highly Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | I |
V/T | 0.5099 | ambiguous | 0.5247 | ambiguous | -1.774 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | I |
V/W | 0.9857 | likely_pathogenic | 0.9873 | pathogenic | -1.384 | Destabilizing | 1.0 | D | 0.616 | neutral | None | None | None | None | I |
V/Y | 0.9295 | likely_pathogenic | 0.9392 | pathogenic | -1.034 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.