Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16985 | 51178;51179;51180 | chr2:178611176;178611175;178611174 | chr2:179475903;179475902;179475901 |
N2AB | 15344 | 46255;46256;46257 | chr2:178611176;178611175;178611174 | chr2:179475903;179475902;179475901 |
N2A | 14417 | 43474;43475;43476 | chr2:178611176;178611175;178611174 | chr2:179475903;179475902;179475901 |
N2B | 7920 | 23983;23984;23985 | chr2:178611176;178611175;178611174 | chr2:179475903;179475902;179475901 |
Novex-1 | 8045 | 24358;24359;24360 | chr2:178611176;178611175;178611174 | chr2:179475903;179475902;179475901 |
Novex-2 | 8112 | 24559;24560;24561 | chr2:178611176;178611175;178611174 | chr2:179475903;179475902;179475901 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.826 | N | 0.436 | 0.241 | 0.306377322295 | gnomAD-4.0.0 | 2.73844E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59934E-06 | 0 | 0 |
T/I | rs116765281 | 0.028 | 0.996 | D | 0.567 | 0.372 | None | gnomAD-2.1.1 | 5.73E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.25315E-04 | 0 |
T/I | rs116765281 | 0.028 | 0.996 | D | 0.567 | 0.372 | None | gnomAD-3.1.2 | 4.61E-05 | None | None | None | None | I | None | 7.25E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 5.89E-05 | 0 | 0 |
T/I | rs116765281 | 0.028 | 0.996 | D | 0.567 | 0.372 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
T/I | rs116765281 | 0.028 | 0.996 | D | 0.567 | 0.372 | None | gnomAD-4.0.0 | 1.30214E-04 | None | None | None | None | I | None | 4.00267E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.67904E-04 | 0 | 1.44194E-04 |
T/P | rs1301584675 | None | 0.996 | D | 0.563 | 0.522 | 0.453119318887 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/P | rs1301584675 | None | 0.996 | D | 0.563 | 0.522 | 0.453119318887 | gnomAD-4.0.0 | 1.31619E-05 | None | None | None | None | I | None | 4.82882E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/S | rs1301584675 | None | 0.826 | N | 0.447 | 0.186 | 0.212008924253 | gnomAD-4.0.0 | 6.84609E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65832E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0684 | likely_benign | 0.0672 | benign | -0.46 | Destabilizing | 0.826 | D | 0.436 | neutral | N | 0.511841424 | None | None | I |
T/C | 0.3829 | ambiguous | 0.3861 | ambiguous | -0.351 | Destabilizing | 0.999 | D | 0.533 | neutral | None | None | None | None | I |
T/D | 0.2999 | likely_benign | 0.3122 | benign | -0.042 | Destabilizing | 0.969 | D | 0.507 | neutral | None | None | None | None | I |
T/E | 0.2319 | likely_benign | 0.2309 | benign | -0.094 | Destabilizing | 0.939 | D | 0.466 | neutral | None | None | None | None | I |
T/F | 0.2187 | likely_benign | 0.2397 | benign | -0.774 | Destabilizing | 0.997 | D | 0.606 | neutral | None | None | None | None | I |
T/G | 0.2091 | likely_benign | 0.2127 | benign | -0.642 | Destabilizing | 0.969 | D | 0.517 | neutral | None | None | None | None | I |
T/H | 0.2002 | likely_benign | 0.213 | benign | -0.939 | Destabilizing | 0.997 | D | 0.592 | neutral | None | None | None | None | I |
T/I | 0.1203 | likely_benign | 0.1246 | benign | -0.088 | Destabilizing | 0.996 | D | 0.567 | neutral | D | 0.542078347 | None | None | I |
T/K | 0.1264 | likely_benign | 0.1377 | benign | -0.603 | Destabilizing | 0.079 | N | 0.231 | neutral | None | None | None | None | I |
T/L | 0.089 | likely_benign | 0.0926 | benign | -0.088 | Destabilizing | 0.969 | D | 0.465 | neutral | None | None | None | None | I |
T/M | 0.0894 | likely_benign | 0.085 | benign | 0.06 | Stabilizing | 0.997 | D | 0.543 | neutral | None | None | None | None | I |
T/N | 0.1019 | likely_benign | 0.1046 | benign | -0.421 | Destabilizing | 0.959 | D | 0.453 | neutral | D | 0.54055012 | None | None | I |
T/P | 0.3401 | ambiguous | 0.3104 | benign | -0.181 | Destabilizing | 0.996 | D | 0.563 | neutral | D | 0.585711886 | None | None | I |
T/Q | 0.1765 | likely_benign | 0.1804 | benign | -0.619 | Destabilizing | 0.982 | D | 0.547 | neutral | None | None | None | None | I |
T/R | 0.1258 | likely_benign | 0.1325 | benign | -0.317 | Destabilizing | 0.046 | N | 0.33 | neutral | None | None | None | None | I |
T/S | 0.0953 | likely_benign | 0.0967 | benign | -0.62 | Destabilizing | 0.826 | D | 0.447 | neutral | N | 0.492443505 | None | None | I |
T/V | 0.098 | likely_benign | 0.1012 | benign | -0.181 | Destabilizing | 0.969 | D | 0.406 | neutral | None | None | None | None | I |
T/W | 0.5934 | likely_pathogenic | 0.596 | pathogenic | -0.771 | Destabilizing | 0.999 | D | 0.632 | neutral | None | None | None | None | I |
T/Y | 0.2705 | likely_benign | 0.2771 | benign | -0.515 | Destabilizing | 0.997 | D | 0.608 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.