Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17001 | 51226;51227;51228 | chr2:178611128;178611127;178611126 | chr2:179475855;179475854;179475853 |
N2AB | 15360 | 46303;46304;46305 | chr2:178611128;178611127;178611126 | chr2:179475855;179475854;179475853 |
N2A | 14433 | 43522;43523;43524 | chr2:178611128;178611127;178611126 | chr2:179475855;179475854;179475853 |
N2B | 7936 | 24031;24032;24033 | chr2:178611128;178611127;178611126 | chr2:179475855;179475854;179475853 |
Novex-1 | 8061 | 24406;24407;24408 | chr2:178611128;178611127;178611126 | chr2:179475855;179475854;179475853 |
Novex-2 | 8128 | 24607;24608;24609 | chr2:178611128;178611127;178611126 | chr2:179475855;179475854;179475853 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.655 | N | 0.527 | 0.084 | 0.344483371355 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4124 | ambiguous | 0.4847 | ambiguous | -1.784 | Destabilizing | 0.004 | N | 0.252 | neutral | None | None | None | None | N |
L/C | 0.4929 | ambiguous | 0.5326 | ambiguous | -1.17 | Destabilizing | 0.94 | D | 0.564 | neutral | None | None | None | None | N |
L/D | 0.898 | likely_pathogenic | 0.9104 | pathogenic | -1.208 | Destabilizing | 0.418 | N | 0.594 | neutral | None | None | None | None | N |
L/E | 0.642 | likely_pathogenic | 0.6905 | pathogenic | -1.196 | Destabilizing | 0.418 | N | 0.576 | neutral | None | None | None | None | N |
L/F | 0.1592 | likely_benign | 0.1904 | benign | -1.284 | Destabilizing | 0.655 | D | 0.527 | neutral | N | 0.500624633 | None | None | N |
L/G | 0.7392 | likely_pathogenic | 0.7769 | pathogenic | -2.128 | Highly Destabilizing | 0.228 | N | 0.517 | neutral | None | None | None | None | N |
L/H | 0.4379 | ambiguous | 0.4965 | ambiguous | -1.38 | Destabilizing | 0.94 | D | 0.589 | neutral | None | None | None | None | N |
L/I | 0.0825 | likely_benign | 0.096 | benign | -0.903 | Destabilizing | 0.002 | N | 0.151 | neutral | N | 0.478166859 | None | None | N |
L/K | 0.5508 | ambiguous | 0.5901 | pathogenic | -1.261 | Destabilizing | 0.418 | N | 0.537 | neutral | None | None | None | None | N |
L/M | 0.1139 | likely_benign | 0.1271 | benign | -0.712 | Destabilizing | 0.716 | D | 0.533 | neutral | None | None | None | None | N |
L/N | 0.6346 | likely_pathogenic | 0.6934 | pathogenic | -1.071 | Destabilizing | 0.418 | N | 0.591 | neutral | None | None | None | None | N |
L/P | 0.9152 | likely_pathogenic | 0.9122 | pathogenic | -1.166 | Destabilizing | 0.593 | D | 0.615 | neutral | None | None | None | None | N |
L/Q | 0.3593 | ambiguous | 0.4068 | ambiguous | -1.237 | Destabilizing | 0.836 | D | 0.596 | neutral | None | None | None | None | N |
L/R | 0.4917 | ambiguous | 0.5363 | ambiguous | -0.683 | Destabilizing | 0.716 | D | 0.587 | neutral | None | None | None | None | N |
L/S | 0.5118 | ambiguous | 0.6102 | pathogenic | -1.711 | Destabilizing | 0.021 | N | 0.358 | neutral | N | 0.513981447 | None | None | N |
L/T | 0.2984 | likely_benign | 0.3636 | ambiguous | -1.577 | Destabilizing | 0.001 | N | 0.25 | neutral | None | None | None | None | N |
L/V | 0.0903 | likely_benign | 0.0973 | benign | -1.166 | Destabilizing | 0.001 | N | 0.161 | neutral | N | 0.454255523 | None | None | N |
L/W | 0.3929 | ambiguous | 0.4188 | ambiguous | -1.356 | Destabilizing | 0.983 | D | 0.569 | neutral | None | None | None | None | N |
L/Y | 0.4449 | ambiguous | 0.4973 | ambiguous | -1.138 | Destabilizing | 0.836 | D | 0.563 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.