Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17009 | 51250;51251;51252 | chr2:178611104;178611103;178611102 | chr2:179475831;179475830;179475829 |
N2AB | 15368 | 46327;46328;46329 | chr2:178611104;178611103;178611102 | chr2:179475831;179475830;179475829 |
N2A | 14441 | 43546;43547;43548 | chr2:178611104;178611103;178611102 | chr2:179475831;179475830;179475829 |
N2B | 7944 | 24055;24056;24057 | chr2:178611104;178611103;178611102 | chr2:179475831;179475830;179475829 |
Novex-1 | 8069 | 24430;24431;24432 | chr2:178611104;178611103;178611102 | chr2:179475831;179475830;179475829 |
Novex-2 | 8136 | 24631;24632;24633 | chr2:178611104;178611103;178611102 | chr2:179475831;179475830;179475829 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 1.0 | D | 0.818 | 0.527 | 0.3571064206 | gnomAD-4.0.0 | 2.05369E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.6995E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0851 | likely_benign | 0.0915 | benign | -0.435 | Destabilizing | 0.997 | D | 0.479 | neutral | N | 0.509285097 | None | None | N |
S/C | 0.1112 | likely_benign | 0.0975 | benign | -0.314 | Destabilizing | 1.0 | D | 0.779 | deleterious | D | 0.542548489 | None | None | N |
S/D | 0.4947 | ambiguous | 0.4935 | ambiguous | -1.524 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
S/E | 0.5482 | ambiguous | 0.528 | ambiguous | -1.375 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | N |
S/F | 0.1451 | likely_benign | 0.1369 | benign | -0.283 | Destabilizing | 1.0 | D | 0.804 | deleterious | N | 0.514004079 | None | None | N |
S/G | 0.134 | likely_benign | 0.1348 | benign | -0.807 | Destabilizing | 0.999 | D | 0.543 | neutral | None | None | None | None | N |
S/H | 0.2999 | likely_benign | 0.263 | benign | -1.473 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
S/I | 0.1604 | likely_benign | 0.1524 | benign | 0.489 | Stabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
S/K | 0.6365 | likely_pathogenic | 0.5964 | pathogenic | -0.553 | Destabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | N |
S/L | 0.0964 | likely_benign | 0.0962 | benign | 0.489 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
S/M | 0.1897 | likely_benign | 0.1821 | benign | 0.522 | Stabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
S/N | 0.1736 | likely_benign | 0.1694 | benign | -1.143 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
S/P | 0.8198 | likely_pathogenic | 0.8079 | pathogenic | 0.217 | Stabilizing | 1.0 | D | 0.818 | deleterious | D | 0.647668156 | None | None | N |
S/Q | 0.4887 | ambiguous | 0.4581 | ambiguous | -0.894 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
S/R | 0.5135 | ambiguous | 0.4717 | ambiguous | -0.933 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
S/T | 0.0804 | likely_benign | 0.0815 | benign | -0.725 | Destabilizing | 0.999 | D | 0.522 | neutral | N | 0.497302033 | None | None | N |
S/V | 0.1689 | likely_benign | 0.1669 | benign | 0.217 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
S/W | 0.2943 | likely_benign | 0.2703 | benign | -0.702 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
S/Y | 0.1435 | likely_benign | 0.1348 | benign | -0.237 | Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.532559265 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.