Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17011 | 51256;51257;51258 | chr2:178611098;178611097;178611096 | chr2:179475825;179475824;179475823 |
N2AB | 15370 | 46333;46334;46335 | chr2:178611098;178611097;178611096 | chr2:179475825;179475824;179475823 |
N2A | 14443 | 43552;43553;43554 | chr2:178611098;178611097;178611096 | chr2:179475825;179475824;179475823 |
N2B | 7946 | 24061;24062;24063 | chr2:178611098;178611097;178611096 | chr2:179475825;179475824;179475823 |
Novex-1 | 8071 | 24436;24437;24438 | chr2:178611098;178611097;178611096 | chr2:179475825;179475824;179475823 |
Novex-2 | 8138 | 24637;24638;24639 | chr2:178611098;178611097;178611096 | chr2:179475825;179475824;179475823 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | rs1471950857 | -0.81 | 0.001 | N | 0.193 | 0.121 | 0.173771789658 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/N | rs1471950857 | -0.81 | 0.001 | N | 0.193 | 0.121 | 0.173771789658 | gnomAD-4.0.0 | 1.59326E-06 | None | None | None | None | N | None | 0 | 2.28833E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2397 | likely_benign | 0.2712 | benign | -0.671 | Destabilizing | 0.129 | N | 0.396 | neutral | None | None | None | None | N |
H/C | 0.137 | likely_benign | 0.1361 | benign | -0.132 | Destabilizing | 0.983 | D | 0.521 | neutral | None | None | None | None | N |
H/D | 0.2522 | likely_benign | 0.278 | benign | -0.746 | Destabilizing | 0.101 | N | 0.383 | neutral | N | 0.502171233 | None | None | N |
H/E | 0.2606 | likely_benign | 0.2798 | benign | -0.664 | Destabilizing | 0.129 | N | 0.305 | neutral | None | None | None | None | N |
H/F | 0.194 | likely_benign | 0.2123 | benign | 0.249 | Stabilizing | 0.557 | D | 0.591 | neutral | None | None | None | None | N |
H/G | 0.3316 | likely_benign | 0.3608 | ambiguous | -1.001 | Destabilizing | 0.129 | N | 0.412 | neutral | None | None | None | None | N |
H/I | 0.1817 | likely_benign | 0.1973 | benign | 0.234 | Stabilizing | 0.264 | N | 0.47 | neutral | None | None | None | None | N |
H/K | 0.2054 | likely_benign | 0.2287 | benign | -0.623 | Destabilizing | 0.129 | N | 0.375 | neutral | None | None | None | None | N |
H/L | 0.0975 | likely_benign | 0.1026 | benign | 0.234 | Stabilizing | None | N | 0.435 | neutral | N | 0.48408601 | None | None | N |
H/M | 0.2951 | likely_benign | 0.3245 | benign | 0.081 | Stabilizing | 0.716 | D | 0.546 | neutral | None | None | None | None | N |
H/N | 0.1006 | likely_benign | 0.1141 | benign | -0.621 | Destabilizing | 0.001 | N | 0.193 | neutral | N | 0.495891894 | None | None | N |
H/P | 0.6971 | likely_pathogenic | 0.7156 | pathogenic | -0.048 | Destabilizing | 0.523 | D | 0.583 | neutral | N | 0.508350679 | None | None | N |
H/Q | 0.1384 | likely_benign | 0.1531 | benign | -0.388 | Destabilizing | 0.007 | N | 0.227 | neutral | N | 0.441841628 | None | None | N |
H/R | 0.1009 | likely_benign | 0.1056 | benign | -0.989 | Destabilizing | 0.213 | N | 0.322 | neutral | N | 0.480586693 | None | None | N |
H/S | 0.1774 | likely_benign | 0.1975 | benign | -0.654 | Destabilizing | 0.129 | N | 0.391 | neutral | None | None | None | None | N |
H/T | 0.1737 | likely_benign | 0.2006 | benign | -0.48 | Destabilizing | 0.004 | N | 0.358 | neutral | None | None | None | None | N |
H/V | 0.1579 | likely_benign | 0.1697 | benign | -0.048 | Destabilizing | 0.129 | N | 0.411 | neutral | None | None | None | None | N |
H/W | 0.304 | likely_benign | 0.3006 | benign | 0.336 | Stabilizing | 0.983 | D | 0.555 | neutral | None | None | None | None | N |
H/Y | 0.0856 | likely_benign | 0.0904 | benign | 0.576 | Stabilizing | 0.523 | D | 0.403 | neutral | N | 0.505557085 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.