Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17015 | 51268;51269;51270 | chr2:178611086;178611085;178611084 | chr2:179475813;179475812;179475811 |
N2AB | 15374 | 46345;46346;46347 | chr2:178611086;178611085;178611084 | chr2:179475813;179475812;179475811 |
N2A | 14447 | 43564;43565;43566 | chr2:178611086;178611085;178611084 | chr2:179475813;179475812;179475811 |
N2B | 7950 | 24073;24074;24075 | chr2:178611086;178611085;178611084 | chr2:179475813;179475812;179475811 |
Novex-1 | 8075 | 24448;24449;24450 | chr2:178611086;178611085;178611084 | chr2:179475813;179475812;179475811 |
Novex-2 | 8142 | 24649;24650;24651 | chr2:178611086;178611085;178611084 | chr2:179475813;179475812;179475811 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.001 | N | 0.29 | 0.162 | 0.542896531885 | gnomAD-4.0.0 | 1.59324E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86218E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0861 | likely_benign | 0.0978 | benign | -1.035 | Destabilizing | None | N | 0.181 | neutral | N | 0.506825913 | None | None | N |
P/C | 0.4922 | ambiguous | 0.5512 | ambiguous | -0.832 | Destabilizing | 0.667 | D | 0.513 | neutral | None | None | None | None | N |
P/D | 0.2949 | likely_benign | 0.3546 | ambiguous | -0.903 | Destabilizing | 0.001 | N | 0.225 | neutral | None | None | None | None | N |
P/E | 0.2041 | likely_benign | 0.2361 | benign | -0.989 | Destabilizing | 0.055 | N | 0.434 | neutral | None | None | None | None | N |
P/F | 0.4054 | ambiguous | 0.5055 | ambiguous | -1.063 | Destabilizing | 0.497 | N | 0.557 | neutral | None | None | None | None | N |
P/G | 0.2463 | likely_benign | 0.273 | benign | -1.241 | Destabilizing | 0.055 | N | 0.43 | neutral | None | None | None | None | N |
P/H | 0.1954 | likely_benign | 0.236 | benign | -0.733 | Destabilizing | 0.602 | D | 0.497 | neutral | N | 0.50892316 | None | None | N |
P/I | 0.2378 | likely_benign | 0.3104 | benign | -0.613 | Destabilizing | 0.001 | N | 0.379 | neutral | None | None | None | None | N |
P/K | 0.2483 | likely_benign | 0.2965 | benign | -0.807 | Destabilizing | 0.055 | N | 0.434 | neutral | None | None | None | None | N |
P/L | 0.1051 | likely_benign | 0.1288 | benign | -0.613 | Destabilizing | 0.001 | N | 0.29 | neutral | N | 0.466192217 | None | None | N |
P/M | 0.2376 | likely_benign | 0.2894 | benign | -0.443 | Destabilizing | 0.497 | N | 0.514 | neutral | None | None | None | None | N |
P/N | 0.2262 | likely_benign | 0.2813 | benign | -0.531 | Destabilizing | 0.22 | N | 0.478 | neutral | None | None | None | None | N |
P/Q | 0.1425 | likely_benign | 0.167 | benign | -0.831 | Destabilizing | 0.22 | N | 0.502 | neutral | None | None | None | None | N |
P/R | 0.2021 | likely_benign | 0.2362 | benign | -0.206 | Destabilizing | 0.001 | N | 0.357 | neutral | N | 0.476160009 | None | None | N |
P/S | 0.1096 | likely_benign | 0.1307 | benign | -0.966 | Destabilizing | 0.003 | N | 0.208 | neutral | N | 0.482961137 | None | None | N |
P/T | 0.0875 | likely_benign | 0.1043 | benign | -0.954 | Destabilizing | 0.001 | N | 0.165 | neutral | N | 0.493884989 | None | None | N |
P/V | 0.1828 | likely_benign | 0.2172 | benign | -0.718 | Destabilizing | 0.055 | N | 0.432 | neutral | None | None | None | None | N |
P/W | 0.5806 | likely_pathogenic | 0.6348 | pathogenic | -1.118 | Destabilizing | 0.958 | D | 0.529 | neutral | None | None | None | None | N |
P/Y | 0.4158 | ambiguous | 0.4791 | ambiguous | -0.839 | Destabilizing | 0.667 | D | 0.545 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.