Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17028 | 51307;51308;51309 | chr2:178611047;178611046;178611045 | chr2:179475774;179475773;179475772 |
N2AB | 15387 | 46384;46385;46386 | chr2:178611047;178611046;178611045 | chr2:179475774;179475773;179475772 |
N2A | 14460 | 43603;43604;43605 | chr2:178611047;178611046;178611045 | chr2:179475774;179475773;179475772 |
N2B | 7963 | 24112;24113;24114 | chr2:178611047;178611046;178611045 | chr2:179475774;179475773;179475772 |
Novex-1 | 8088 | 24487;24488;24489 | chr2:178611047;178611046;178611045 | chr2:179475774;179475773;179475772 |
Novex-2 | 8155 | 24688;24689;24690 | chr2:178611047;178611046;178611045 | chr2:179475774;179475773;179475772 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1403894865 | -0.13 | 0.013 | N | 0.459 | 0.291 | 0.32053947749 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1216 | likely_benign | 0.1178 | benign | -1.03 | Destabilizing | 0.429 | N | 0.627 | neutral | D | 0.55891321 | None | None | N |
T/C | 0.4729 | ambiguous | 0.4973 | ambiguous | -0.777 | Destabilizing | 0.995 | D | 0.744 | deleterious | None | None | None | None | N |
T/D | 0.6347 | likely_pathogenic | 0.6533 | pathogenic | -1.438 | Destabilizing | 0.945 | D | 0.762 | deleterious | None | None | None | None | N |
T/E | 0.4844 | ambiguous | 0.4978 | ambiguous | -1.299 | Destabilizing | 0.945 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/F | 0.3534 | ambiguous | 0.3854 | ambiguous | -0.788 | Destabilizing | 0.894 | D | 0.8 | deleterious | None | None | None | None | N |
T/G | 0.4259 | ambiguous | 0.4173 | ambiguous | -1.41 | Destabilizing | 0.945 | D | 0.739 | prob.delet. | None | None | None | None | N |
T/H | 0.2821 | likely_benign | 0.2925 | benign | -1.665 | Destabilizing | 0.995 | D | 0.788 | deleterious | None | None | None | None | N |
T/I | 0.1987 | likely_benign | 0.2138 | benign | -0.056 | Destabilizing | 0.013 | N | 0.459 | neutral | N | 0.514260049 | None | None | N |
T/K | 0.2372 | likely_benign | 0.239 | benign | -0.721 | Destabilizing | 0.928 | D | 0.749 | deleterious | N | 0.506260971 | None | None | N |
T/L | 0.1583 | likely_benign | 0.1651 | benign | -0.056 | Destabilizing | 0.146 | N | 0.651 | neutral | None | None | None | None | N |
T/M | 0.1162 | likely_benign | 0.1162 | benign | 0.111 | Stabilizing | 0.894 | D | 0.763 | deleterious | None | None | None | None | N |
T/N | 0.1942 | likely_benign | 0.2011 | benign | -1.232 | Destabilizing | 0.981 | D | 0.696 | prob.neutral | None | None | None | None | N |
T/P | 0.837 | likely_pathogenic | 0.826 | pathogenic | -0.348 | Destabilizing | 0.975 | D | 0.761 | deleterious | D | 0.689090076 | None | None | N |
T/Q | 0.283 | likely_benign | 0.2798 | benign | -1.148 | Destabilizing | 0.981 | D | 0.768 | deleterious | None | None | None | None | N |
T/R | 0.2254 | likely_benign | 0.2242 | benign | -0.788 | Destabilizing | 0.928 | D | 0.767 | deleterious | N | 0.510323634 | None | None | N |
T/S | 0.1528 | likely_benign | 0.1502 | benign | -1.406 | Destabilizing | 0.787 | D | 0.619 | neutral | D | 0.532847594 | None | None | N |
T/V | 0.1744 | likely_benign | 0.184 | benign | -0.348 | Destabilizing | 0.031 | N | 0.49 | neutral | None | None | None | None | N |
T/W | 0.7911 | likely_pathogenic | 0.8142 | pathogenic | -0.91 | Destabilizing | 0.995 | D | 0.773 | deleterious | None | None | None | None | N |
T/Y | 0.4381 | ambiguous | 0.4727 | ambiguous | -0.566 | Destabilizing | 0.945 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.