Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17057 | 51394;51395;51396 | chr2:178610357;178610356;178610355 | chr2:179475084;179475083;179475082 |
N2AB | 15416 | 46471;46472;46473 | chr2:178610357;178610356;178610355 | chr2:179475084;179475083;179475082 |
N2A | 14489 | 43690;43691;43692 | chr2:178610357;178610356;178610355 | chr2:179475084;179475083;179475082 |
N2B | 7992 | 24199;24200;24201 | chr2:178610357;178610356;178610355 | chr2:179475084;179475083;179475082 |
Novex-1 | 8117 | 24574;24575;24576 | chr2:178610357;178610356;178610355 | chr2:179475084;179475083;179475082 |
Novex-2 | 8184 | 24775;24776;24777 | chr2:178610357;178610356;178610355 | chr2:179475084;179475083;179475082 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.026 | N | 0.28 | 0.185 | 0.149567049428 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0964 | likely_benign | 0.0874 | benign | -0.469 | Destabilizing | 0.825 | D | 0.517 | neutral | None | None | None | None | N |
S/C | 0.1655 | likely_benign | 0.1579 | benign | -0.331 | Destabilizing | 0.999 | D | 0.65 | neutral | N | 0.515839504 | None | None | N |
S/D | 0.5888 | likely_pathogenic | 0.582 | pathogenic | -0.152 | Destabilizing | 0.851 | D | 0.539 | neutral | None | None | None | None | N |
S/E | 0.6353 | likely_pathogenic | 0.6066 | pathogenic | -0.227 | Destabilizing | 0.919 | D | 0.537 | neutral | None | None | None | None | N |
S/F | 0.279 | likely_benign | 0.2634 | benign | -0.91 | Destabilizing | 0.996 | D | 0.729 | prob.delet. | None | None | None | None | N |
S/G | 0.1097 | likely_benign | 0.1029 | benign | -0.629 | Destabilizing | 0.811 | D | 0.555 | neutral | N | 0.490082024 | None | None | N |
S/H | 0.475 | ambiguous | 0.465 | ambiguous | -1.159 | Destabilizing | 0.997 | D | 0.655 | neutral | None | None | None | None | N |
S/I | 0.2314 | likely_benign | 0.2149 | benign | -0.172 | Destabilizing | 0.968 | D | 0.725 | prob.delet. | N | 0.478464341 | None | None | N |
S/K | 0.8266 | likely_pathogenic | 0.8106 | pathogenic | -0.707 | Destabilizing | 0.919 | D | 0.543 | neutral | None | None | None | None | N |
S/L | 0.1378 | likely_benign | 0.1291 | benign | -0.172 | Destabilizing | 0.919 | D | 0.608 | neutral | None | None | None | None | N |
S/M | 0.1967 | likely_benign | 0.1829 | benign | 0.127 | Stabilizing | 0.999 | D | 0.632 | neutral | None | None | None | None | N |
S/N | 0.1778 | likely_benign | 0.1739 | benign | -0.464 | Destabilizing | 0.026 | N | 0.28 | neutral | N | 0.513657157 | None | None | N |
S/P | 0.9402 | likely_pathogenic | 0.9268 | pathogenic | -0.24 | Destabilizing | 0.996 | D | 0.659 | neutral | None | None | None | None | N |
S/Q | 0.5627 | ambiguous | 0.5352 | ambiguous | -0.713 | Destabilizing | 0.988 | D | 0.595 | neutral | None | None | None | None | N |
S/R | 0.8023 | likely_pathogenic | 0.7772 | pathogenic | -0.473 | Destabilizing | 0.968 | D | 0.657 | neutral | N | 0.505205164 | None | None | N |
S/T | 0.0749 | likely_benign | 0.0711 | benign | -0.523 | Destabilizing | 0.103 | N | 0.247 | neutral | N | 0.430291633 | None | None | N |
S/V | 0.1928 | likely_benign | 0.1754 | benign | -0.24 | Destabilizing | 0.976 | D | 0.637 | neutral | None | None | None | None | N |
S/W | 0.5536 | ambiguous | 0.5401 | ambiguous | -0.903 | Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
S/Y | 0.3412 | ambiguous | 0.3296 | benign | -0.647 | Destabilizing | 0.996 | D | 0.724 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.