Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17089 | 51490;51491;51492 | chr2:178610261;178610260;178610259 | chr2:179474988;179474987;179474986 |
N2AB | 15448 | 46567;46568;46569 | chr2:178610261;178610260;178610259 | chr2:179474988;179474987;179474986 |
N2A | 14521 | 43786;43787;43788 | chr2:178610261;178610260;178610259 | chr2:179474988;179474987;179474986 |
N2B | 8024 | 24295;24296;24297 | chr2:178610261;178610260;178610259 | chr2:179474988;179474987;179474986 |
Novex-1 | 8149 | 24670;24671;24672 | chr2:178610261;178610260;178610259 | chr2:179474988;179474987;179474986 |
Novex-2 | 8216 | 24871;24872;24873 | chr2:178610261;178610260;178610259 | chr2:179474988;179474987;179474986 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 1.0 | N | 0.588 | 0.371 | 0.370051654043 | gnomAD-4.0.0 | 1.59282E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.7767E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8394 | likely_pathogenic | 0.832 | pathogenic | -0.726 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
A/D | 0.9369 | likely_pathogenic | 0.9116 | pathogenic | -0.496 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | N | 0.506224368 | None | None | N |
A/E | 0.879 | likely_pathogenic | 0.8413 | pathogenic | -0.563 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
A/F | 0.8371 | likely_pathogenic | 0.8168 | pathogenic | -0.729 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
A/G | 0.4017 | ambiguous | 0.3757 | ambiguous | -0.748 | Destabilizing | 1.0 | D | 0.588 | neutral | N | 0.490564269 | None | None | N |
A/H | 0.9245 | likely_pathogenic | 0.9034 | pathogenic | -0.73 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
A/I | 0.6845 | likely_pathogenic | 0.6559 | pathogenic | -0.193 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
A/K | 0.9457 | likely_pathogenic | 0.9279 | pathogenic | -0.896 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
A/L | 0.569 | likely_pathogenic | 0.5626 | ambiguous | -0.193 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
A/M | 0.5722 | likely_pathogenic | 0.5507 | ambiguous | -0.303 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
A/N | 0.7611 | likely_pathogenic | 0.7376 | pathogenic | -0.569 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
A/P | 0.8172 | likely_pathogenic | 0.8104 | pathogenic | -0.272 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | N | 0.485273092 | None | None | N |
A/Q | 0.819 | likely_pathogenic | 0.7915 | pathogenic | -0.739 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
A/R | 0.9173 | likely_pathogenic | 0.8916 | pathogenic | -0.508 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
A/S | 0.1968 | likely_benign | 0.1852 | benign | -0.911 | Destabilizing | 1.0 | D | 0.605 | neutral | N | 0.466455258 | None | None | N |
A/T | 0.3341 | likely_benign | 0.2961 | benign | -0.878 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | N | 0.48280879 | None | None | N |
A/V | 0.4253 | ambiguous | 0.3829 | ambiguous | -0.272 | Destabilizing | 1.0 | D | 0.655 | neutral | N | 0.4528326 | None | None | N |
A/W | 0.9734 | likely_pathogenic | 0.9684 | pathogenic | -0.988 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
A/Y | 0.905 | likely_pathogenic | 0.8851 | pathogenic | -0.6 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.