Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17091 | 51496;51497;51498 | chr2:178610255;178610254;178610253 | chr2:179474982;179474981;179474980 |
N2AB | 15450 | 46573;46574;46575 | chr2:178610255;178610254;178610253 | chr2:179474982;179474981;179474980 |
N2A | 14523 | 43792;43793;43794 | chr2:178610255;178610254;178610253 | chr2:179474982;179474981;179474980 |
N2B | 8026 | 24301;24302;24303 | chr2:178610255;178610254;178610253 | chr2:179474982;179474981;179474980 |
Novex-1 | 8151 | 24676;24677;24678 | chr2:178610255;178610254;178610253 | chr2:179474982;179474981;179474980 |
Novex-2 | 8218 | 24877;24878;24879 | chr2:178610255;178610254;178610253 | chr2:179474982;179474981;179474980 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | None | None | 1.0 | N | 0.573 | 0.438 | 0.370789594751 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9807 | likely_pathogenic | 0.9682 | pathogenic | -0.264 | Destabilizing | 0.999 | D | 0.441 | neutral | None | None | None | None | N |
R/C | 0.8778 | likely_pathogenic | 0.788 | pathogenic | -0.32 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
R/D | 0.9926 | likely_pathogenic | 0.988 | pathogenic | 0.019 | Stabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
R/E | 0.9591 | likely_pathogenic | 0.936 | pathogenic | 0.09 | Stabilizing | 0.999 | D | 0.48 | neutral | None | None | None | None | N |
R/F | 0.9806 | likely_pathogenic | 0.9696 | pathogenic | -0.416 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
R/G | 0.9519 | likely_pathogenic | 0.9159 | pathogenic | -0.485 | Destabilizing | 1.0 | D | 0.522 | neutral | N | 0.483595437 | None | None | N |
R/H | 0.6857 | likely_pathogenic | 0.553 | ambiguous | -0.857 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
R/I | 0.958 | likely_pathogenic | 0.9356 | pathogenic | 0.293 | Stabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
R/K | 0.4836 | ambiguous | 0.4003 | ambiguous | -0.268 | Destabilizing | 0.997 | D | 0.394 | neutral | N | 0.471533004 | None | None | N |
R/L | 0.8985 | likely_pathogenic | 0.8469 | pathogenic | 0.293 | Stabilizing | 1.0 | D | 0.522 | neutral | None | None | None | None | N |
R/M | 0.9438 | likely_pathogenic | 0.9139 | pathogenic | -0.037 | Destabilizing | 1.0 | D | 0.649 | neutral | N | 0.474673694 | None | None | N |
R/N | 0.9818 | likely_pathogenic | 0.9711 | pathogenic | 0.112 | Stabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | N |
R/P | 0.9937 | likely_pathogenic | 0.9904 | pathogenic | 0.128 | Stabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | N |
R/Q | 0.6461 | likely_pathogenic | 0.5157 | ambiguous | -0.067 | Destabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | N |
R/S | 0.985 | likely_pathogenic | 0.9735 | pathogenic | -0.427 | Destabilizing | 1.0 | D | 0.572 | neutral | N | 0.45925714 | None | None | N |
R/T | 0.9668 | likely_pathogenic | 0.9407 | pathogenic | -0.21 | Destabilizing | 1.0 | D | 0.573 | neutral | N | 0.475208027 | None | None | N |
R/V | 0.9675 | likely_pathogenic | 0.9505 | pathogenic | 0.128 | Stabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
R/W | 0.8535 | likely_pathogenic | 0.7613 | pathogenic | -0.327 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | N | 0.473116758 | None | None | N |
R/Y | 0.9579 | likely_pathogenic | 0.9338 | pathogenic | 0.052 | Stabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.