Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17107 | 51544;51545;51546 | chr2:178610207;178610206;178610205 | chr2:179474934;179474933;179474932 |
N2AB | 15466 | 46621;46622;46623 | chr2:178610207;178610206;178610205 | chr2:179474934;179474933;179474932 |
N2A | 14539 | 43840;43841;43842 | chr2:178610207;178610206;178610205 | chr2:179474934;179474933;179474932 |
N2B | 8042 | 24349;24350;24351 | chr2:178610207;178610206;178610205 | chr2:179474934;179474933;179474932 |
Novex-1 | 8167 | 24724;24725;24726 | chr2:178610207;178610206;178610205 | chr2:179474934;179474933;179474932 |
Novex-2 | 8234 | 24925;24926;24927 | chr2:178610207;178610206;178610205 | chr2:179474934;179474933;179474932 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 0.001 | N | 0.247 | 0.327 | 0.270889551736 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/S | None | None | 0.007 | N | 0.169 | 0.114 | 0.224531998449 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0827 | likely_benign | 0.0914 | benign | -0.933 | Destabilizing | 0.003 | N | 0.165 | neutral | D | 0.52283419 | None | None | N |
T/C | 0.3275 | likely_benign | 0.3294 | benign | -0.498 | Destabilizing | 0.983 | D | 0.476 | neutral | None | None | None | None | N |
T/D | 0.4032 | ambiguous | 0.452 | ambiguous | 0.024 | Stabilizing | 0.264 | N | 0.426 | neutral | None | None | None | None | N |
T/E | 0.3146 | likely_benign | 0.3465 | ambiguous | 0.057 | Stabilizing | 0.129 | N | 0.391 | neutral | None | None | None | None | N |
T/F | 0.229 | likely_benign | 0.2423 | benign | -0.933 | Destabilizing | 0.836 | D | 0.527 | neutral | None | None | None | None | N |
T/G | 0.2519 | likely_benign | 0.2682 | benign | -1.217 | Destabilizing | 0.129 | N | 0.385 | neutral | None | None | None | None | N |
T/H | 0.2476 | likely_benign | 0.2526 | benign | -1.37 | Destabilizing | 0.716 | D | 0.528 | neutral | None | None | None | None | N |
T/I | 0.1034 | likely_benign | 0.1066 | benign | -0.259 | Destabilizing | 0.794 | D | 0.519 | neutral | N | 0.521140679 | None | None | N |
T/K | 0.3368 | likely_benign | 0.3702 | ambiguous | -0.62 | Destabilizing | 0.264 | N | 0.407 | neutral | None | None | None | None | N |
T/L | 0.0842 | likely_benign | 0.0861 | benign | -0.259 | Destabilizing | 0.418 | N | 0.424 | neutral | None | None | None | None | N |
T/M | 0.0726 | likely_benign | 0.0737 | benign | -0.08 | Destabilizing | 0.836 | D | 0.492 | neutral | None | None | None | None | N |
T/N | 0.0836 | likely_benign | 0.096 | benign | -0.631 | Destabilizing | 0.001 | N | 0.167 | neutral | N | 0.521140679 | None | None | N |
T/P | 0.1361 | likely_benign | 0.167 | benign | -0.451 | Destabilizing | 0.001 | N | 0.247 | neutral | N | 0.503595068 | None | None | N |
T/Q | 0.214 | likely_benign | 0.2109 | benign | -0.697 | Destabilizing | 0.01 | N | 0.314 | neutral | None | None | None | None | N |
T/R | 0.328 | likely_benign | 0.3738 | ambiguous | -0.458 | Destabilizing | 0.264 | N | 0.477 | neutral | None | None | None | None | N |
T/S | 0.1086 | likely_benign | 0.1217 | benign | -0.972 | Destabilizing | 0.007 | N | 0.169 | neutral | N | 0.47243933 | None | None | N |
T/V | 0.0863 | likely_benign | 0.0882 | benign | -0.451 | Destabilizing | 0.418 | N | 0.349 | neutral | None | None | None | None | N |
T/W | 0.5777 | likely_pathogenic | 0.5807 | pathogenic | -0.873 | Destabilizing | 0.983 | D | 0.565 | neutral | None | None | None | None | N |
T/Y | 0.2678 | likely_benign | 0.275 | benign | -0.636 | Destabilizing | 0.94 | D | 0.529 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.