Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17109 | 51550;51551;51552 | chr2:178610201;178610200;178610199 | chr2:179474928;179474927;179474926 |
N2AB | 15468 | 46627;46628;46629 | chr2:178610201;178610200;178610199 | chr2:179474928;179474927;179474926 |
N2A | 14541 | 43846;43847;43848 | chr2:178610201;178610200;178610199 | chr2:179474928;179474927;179474926 |
N2B | 8044 | 24355;24356;24357 | chr2:178610201;178610200;178610199 | chr2:179474928;179474927;179474926 |
Novex-1 | 8169 | 24730;24731;24732 | chr2:178610201;178610200;178610199 | chr2:179474928;179474927;179474926 |
Novex-2 | 8236 | 24931;24932;24933 | chr2:178610201;178610200;178610199 | chr2:179474928;179474927;179474926 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.999 | N | 0.594 | 0.421 | 0.307016933798 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6156 | likely_pathogenic | 0.652 | pathogenic | -0.137 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/C | 0.8647 | likely_pathogenic | 0.8825 | pathogenic | -0.229 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
K/D | 0.762 | likely_pathogenic | 0.7922 | pathogenic | 0.252 | Stabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
K/E | 0.3891 | ambiguous | 0.4452 | ambiguous | 0.28 | Stabilizing | 0.999 | D | 0.594 | neutral | N | 0.444213117 | None | None | N |
K/F | 0.9461 | likely_pathogenic | 0.957 | pathogenic | -0.238 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
K/G | 0.6347 | likely_pathogenic | 0.6928 | pathogenic | -0.376 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
K/H | 0.4894 | ambiguous | 0.5151 | ambiguous | -0.672 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
K/I | 0.764 | likely_pathogenic | 0.7812 | pathogenic | 0.425 | Stabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
K/L | 0.6846 | likely_pathogenic | 0.709 | pathogenic | 0.425 | Stabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
K/M | 0.5527 | ambiguous | 0.5626 | ambiguous | 0.262 | Stabilizing | 1.0 | D | 0.75 | deleterious | N | 0.479143919 | None | None | N |
K/N | 0.624 | likely_pathogenic | 0.6625 | pathogenic | 0.196 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.489793478 | None | None | N |
K/P | 0.6905 | likely_pathogenic | 0.7227 | pathogenic | 0.267 | Stabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
K/Q | 0.235 | likely_benign | 0.2604 | benign | 0.033 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.481347353 | None | None | N |
K/R | 0.0989 | likely_benign | 0.1062 | benign | -0.084 | Destabilizing | 0.999 | D | 0.527 | neutral | N | 0.488081324 | None | None | N |
K/S | 0.6174 | likely_pathogenic | 0.6594 | pathogenic | -0.388 | Destabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | N |
K/T | 0.3364 | likely_benign | 0.3376 | benign | -0.191 | Destabilizing | 1.0 | D | 0.78 | deleterious | N | 0.416429082 | None | None | N |
K/V | 0.6863 | likely_pathogenic | 0.6933 | pathogenic | 0.267 | Stabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
K/W | 0.9046 | likely_pathogenic | 0.925 | pathogenic | -0.194 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
K/Y | 0.8756 | likely_pathogenic | 0.8982 | pathogenic | 0.145 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.