Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17135 | 51628;51629;51630 | chr2:178610123;178610122;178610121 | chr2:179474850;179474849;179474848 |
N2AB | 15494 | 46705;46706;46707 | chr2:178610123;178610122;178610121 | chr2:179474850;179474849;179474848 |
N2A | 14567 | 43924;43925;43926 | chr2:178610123;178610122;178610121 | chr2:179474850;179474849;179474848 |
N2B | 8070 | 24433;24434;24435 | chr2:178610123;178610122;178610121 | chr2:179474850;179474849;179474848 |
Novex-1 | 8195 | 24808;24809;24810 | chr2:178610123;178610122;178610121 | chr2:179474850;179474849;179474848 |
Novex-2 | 8262 | 25009;25010;25011 | chr2:178610123;178610122;178610121 | chr2:179474850;179474849;179474848 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs756515794 | -1.28 | 1.0 | N | 0.922 | 0.494 | 0.72014139575 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.62E-05 | None | 0 | None | 0 | 0 | 0 |
L/P | rs756515794 | -1.28 | 1.0 | N | 0.922 | 0.494 | 0.72014139575 | gnomAD-4.0.0 | 1.59318E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78505E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.714 | likely_pathogenic | 0.7403 | pathogenic | -2.072 | Highly Destabilizing | 0.998 | D | 0.831 | deleterious | None | None | None | None | N |
L/C | 0.81 | likely_pathogenic | 0.8112 | pathogenic | -1.199 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
L/D | 0.9797 | likely_pathogenic | 0.9827 | pathogenic | -1.951 | Destabilizing | 1.0 | D | 0.927 | deleterious | None | None | None | None | N |
L/E | 0.8725 | likely_pathogenic | 0.9038 | pathogenic | -1.829 | Destabilizing | 0.999 | D | 0.925 | deleterious | None | None | None | None | N |
L/F | 0.5398 | ambiguous | 0.6668 | pathogenic | -1.219 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
L/G | 0.9218 | likely_pathogenic | 0.9271 | pathogenic | -2.521 | Highly Destabilizing | 0.999 | D | 0.905 | deleterious | None | None | None | None | N |
L/H | 0.8658 | likely_pathogenic | 0.9005 | pathogenic | -1.882 | Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
L/I | 0.1292 | likely_benign | 0.1775 | benign | -0.837 | Destabilizing | 0.998 | D | 0.666 | prob.neutral | None | None | None | None | N |
L/K | 0.8966 | likely_pathogenic | 0.9125 | pathogenic | -1.602 | Destabilizing | 0.999 | D | 0.906 | deleterious | None | None | None | None | N |
L/M | 0.1545 | likely_benign | 0.1852 | benign | -0.648 | Destabilizing | 0.999 | D | 0.771 | deleterious | N | 0.50612558 | None | None | N |
L/N | 0.8535 | likely_pathogenic | 0.88 | pathogenic | -1.61 | Destabilizing | 1.0 | D | 0.931 | deleterious | None | None | None | None | N |
L/P | 0.9531 | likely_pathogenic | 0.9579 | pathogenic | -1.223 | Destabilizing | 1.0 | D | 0.922 | deleterious | N | 0.448133282 | None | None | N |
L/Q | 0.6984 | likely_pathogenic | 0.7706 | pathogenic | -1.629 | Destabilizing | 1.0 | D | 0.923 | deleterious | N | 0.469528225 | None | None | N |
L/R | 0.8779 | likely_pathogenic | 0.8954 | pathogenic | -1.16 | Destabilizing | 0.999 | D | 0.92 | deleterious | N | 0.464919869 | None | None | N |
L/S | 0.8113 | likely_pathogenic | 0.8567 | pathogenic | -2.252 | Highly Destabilizing | 0.999 | D | 0.883 | deleterious | None | None | None | None | N |
L/T | 0.4489 | ambiguous | 0.4769 | ambiguous | -2.005 | Highly Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
L/V | 0.1674 | likely_benign | 0.2051 | benign | -1.223 | Destabilizing | 0.997 | D | 0.661 | prob.neutral | N | 0.477994829 | None | None | N |
L/W | 0.859 | likely_pathogenic | 0.8906 | pathogenic | -1.5 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/Y | 0.8789 | likely_pathogenic | 0.9137 | pathogenic | -1.225 | Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.